Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP007646_1                                                                                                                 top


Strain : Lactobacillus salivarius GCF_000758365 RefSeq :NZ_CP007646 (chromosome circular)
CRISPR id : NZ_CP007646_1
DR consensus (36 bp) : AGTAAGAACATATCTCCGAATATAGGAGACGAAAACNumber of repetitions :27
Begin Position : 810173 End Position : 812140

810173AGTAAGAACATATCTCCGAATATAGGAGACGAAAACTTTCTTTTCCATAATCTGTATAAGTCAACACTTCCTGT810246
810247AGTAAGAACATATCTCCGAATATAGGAGACGAAAACAACGGTACTAAAAAAGCATTTAGTTTTCCTGAAGTTGAT810321
810322AGTAAGAACATATCTCCGAATATAGGAGACGAAAACCCAATTCCTTCAACTCCATAAATTAAAATTTTCATT810393
810394AGTAAGAACATATCTCCGAATATAGGAGACGAAAACAGCTTCAATTTTGAAACATGTAATAATATTTAGTTT810465
810466AGTAAGAACATATCTCCGAATATAGGAGACGAAAACCTAGACTACCTAGTATTAAGTTGTCAAAGAGCGTACTT810539
810540AGTAAGAACATATCTCCGAATATAGGAGACGAAAACAACACTATTGAACACTCTAAAAGAGTCATCCATCTTATC810614
810615AGTAAGAACATATCTCCGAATATAGGAGACGAAAACACCTTGGTGGTGTTGATGGTTTAGTTCACGTTTCTG810686
810687AGTAAGAACATATCTCCGAATATAGGAGACGAAAACCTTCCAAAACTTTGATACGTTTACCTACTGCCTCAGTGAT810762
810763AGTAAGAACATATCTCCGAATATAGGAGACGAAAACTTGAAACATAATTTAATATTAAGTTTTTTTAGAACATTTT810838
810839AGTAAGAACATATCTCCGAATATAGGAGACGAAAACTTGAAGTAGATTAAATTATTAAGTTTTCATAGAACGTGT810913
810914AGTAAGAACATATCTCCGAATATAGGAGACGAAAACAAAACTTATCACTTAAATGTACTTTTTAAGTACATTTTT810988
810989AGTAAGAACATATCTCCGAATATAGGAGACGAAAACCTCAATTTTATTGACGTACTCAGTACCGCTTTTAC811059
811060AGTAAGAACATATCTCCGAATATAGGAGACGAAAACCCGAAGCGGGATATAACAATACATTTACACTCTTAAG811132
811133AGTAAGAACATATCTCCGAATATAGGAGACGAAAACTCATTGAAACTCTTAACAAACTTTTTCATAATTTTAT811205
811206AGTAAGAACATATCTCCGAATATAGGAGACGAAAACGCATAAGATTTTCTTGTCTATTTTTTTAACCCATTCTT811279
811280AGTAAGAACATATCTCCGAATATAGGAGACGAAAACCGGGGGATACTTCCAAACATATTTAAAAATTGACTAATT811354
811355AGTAAGAACATATCTCCGAATATAGGAGACGAAAACTTCATTTATTGAACATCTTTATTTAATCATATGCTCTT811428
811429AGTAAGAACATATCTCCGAATATAGGAGACGAAAACACCAAATCTTCTTCTGTTAGTTCCCAAGCCTCTTTACC811502
811503AGTAAGAACATATCTCCGAATATAGGAGACGAAAACGCTCCACTTGAAGCTTATCGCACTCAAGCCAAGCAATTT811577
811578AGTAAGAACATATCTCCGAATATAGGAGACGAAAACGGTTCATCTACTTGTTTGAATGATTTTACCAATTTCA811650
811651AGTAAGAACATATCTCCGAATATAGGAGACGAAAACACCCCATGAGGTTAGTTGCATAGTATTTATACCCCCACCCCC811728
811729AGTAAGAACATATCTCCGAGTATAGGAGACGAAAACTCTATCTTCTGGCATAAAGATTTCATAACCTACC811798
811799AGTAAGAACATATCTCCGAATATAGGAGACGAAAACATCAAGCTCATAATTGAAATTGTTGTAAAAATTAATGCC811873
811874AGTAAGAACATATCTCCGAATATAGGAGACGAAAACTTCGTTCATTAGGTTTATCAATCTTTCATCAAATTTCATTTT811951
811952AGTAAGAACATATCTTCGAATATAGGAGACGAAAACTTACCACCAGAAAAAGCAACTAAGATATTATCAAATTCATT812028
812029AGTAAGAACATATCTCCGAATGTAGGAGACGAAAACCCTGCTGTTGTTAGTTCGATCATTTTTCTTCATCCTTTCG812104
812105AGTAAGAACATATCTCCGAATATAGGAGCTTGAATC812140
Left flanking sequence : Till position 810173 (length bp)
TTTTGACCAAATAATACTTATTAATTTGACCTATTGCCCGTTTAGGGTACCATTAAAAATGTCAATAATT
GTTGATATATCAACTAATTGATCAAAGAGT
Right flanking sequence : From position 812140 (length bp)
TAATTAAAGTGATAAGAAGGAGAGTAAAAGTTAGAAAAAATAATATATAATATAGGTAATTAATTAGAAA
GTGGTGTAATTATGACAACATTAATATCAT
Print the CRISPR sequence : From position bp To position bp