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CRISPRs details
NZ_CP009149_11
Flanking alignement tool
Page manual
  
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NZ_CP009149_11                                                                                                                 
top
Strain :
Methanocaldococcus bathoardescens GCF_000739065
RefSeq :
NZ_CP009149 (chromosome circular)
CRISPR id :
NZ_CP009149_11
DR consensus (30 bp) :
GTTAAAATCAGACCGTTTCGGTATGGAAAC
Number of repetitions :
17
Begin Position :
1439422
End Position :
1440582
1439422
GTTAAAATCAGACCGTTTCGGTATGGAAAC
CTAAATATATAATTTTACTTCTTGGTGATATTTCTTGTTAAA
1439493
1439494
GTTAAAATCAGACCGTTTCGGTATGGAAAC
ACTTCATATATGACATCTTTATCTATACAACCGCATAAAA
1439563
1439564
GTTAAAATCAGACCGTTTCGGTATGGAAAC
TCTTTTACTCCCTTCAAAACATCCTCTAAAGTTATCTCTACCATA
1439638
1439639
GTTAAAATCAGACCGTTTCGGTATGGAAAC
TTTGGGATTGTGGCAACACATTAAACATTGTTGGT
1439703
1439704
GTTAAAATCAGACCGTTTCGGTATGGAAAC
CATTATCTACATACCATAAATTTTTAACCACAGCCTCACC
1439773
1439774
GTTAAAATCAGACCGTTTCGGTATGGAAAC
TTAACAAAGTTCCATCCTTTCATACCAACTTCTGG
1439838
1439839
GTTAAAATCAGACCGTTTCGGTATGGAAAC
AATAAATATAAAAGGAGCTCCAAACCCTTCCCCTAATCTATGAAACCTT
1439917
1439918
GTTAAAATCAGACCGTTTCGGTATGGAAAC
TTCTCAATGAATTCTTTTTCCATAAATTCTTTTAATT
1439984
1439985
GTTAAAATCAGACCGTTTCGGTATGGAAAC
ATCAAACATGTTCTTAACAATTTTCTTTGCTTTGTCT
1440051
1440052
GTTAAAATCAGACCGTTTCGGTATGGAAAC
TCTATTGTTCCTCCAGTAATTATCTGGGGAAAGTCTGGGTATG
1440124
1440125
GTTAAAATCAGACCGTTTCGGTATGGAAAC
ACTTATTGGGTTAGGGAGAGCCCGTGACTTTCCAAAACCTAAC
1440197
1440198
GTTAAAATCAGACCGTTTCGGTATGGAAAC
TCTTCTTCTGCTACTTAGCCATGCCCTATATGCTCTCATACTTCTAAAGTG
1440278
1440279
GTTAAAATCAGACCGTTTCGGTATGGAAAC
TTTTTATCTAAGAATTGACAAAACTTTTCATAAAGCTCGTT
1440349
1440350
GTTAAAATCAGACCGTTTCGGTATGGAAAC
ACTAATAACGTTGATACACTAAATTTAATAGTAGGA
1440415
1440416
GTTAAAATCAGACCGTTTCGGTATGGAAAC
GCCAATAGAAGAGTGGAATTACATCGTTAGATTTATCAAA
1440485
1440486
GTTAAAATCAGACCGTTTCGGTATGGAAAC
GAGAAAAGAGAATGTGTTTGATGTTAAAATAATATTC
1440552
1440553
GTTAAAATCAGACCGTTACGGTATGGAAAC
1440582
Left flanking sequence : Till position 1439422 (length
bp)
GTTTATAAATAAAAGGGGTTATTAACCCTTCGAAAATTATAGTATGAAAAAGCTTAAATATTAAGAGAGA
TAACATATAAAATAAGCAAAATAATGCCCT
Right flanking sequence : From position 1440582 (length
bp)
ATCTACTTGTTTTTTATCATTTTTGAAAAAAGCTTAGTATATCCTCAAAACTGAAATTCTTTTTTAGTAT
TATTATAAAAAAAGATAAAATATAATATAT
Print the CRISPR sequence : From position
bp To position
bp