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CRISPRs details
NZ_CP009149_5
Flanking alignement tool
Page manual
  
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NZ_CP009149_5                                                                                                                 
top
Strain :
Methanocaldococcus bathoardescens GCF_000739065
RefSeq :
NZ_CP009149 (chromosome circular)
CRISPR id :
NZ_CP009149_5
DR consensus (30 bp) :
ATTTCCATACCGAAACGGTCTGATTTTAAC
Number of repetitions :
18
Begin Position :
320136
End Position :
321364
320136
ATTTTTAAACCGAAACGCTCTAATTCCATA
GGGGGCTACACCCCCTATTGGGATACTCCCCTATTTTTGTTTTATTTATTAAAATTAT
320223
320224
GTTTTTACACCGTAACGGTCTGATTTTAAC
ATAATATATACTCTTAGCTTAAAAGTATATGATAAA
320289
320290
GTTTCCATACCGAAACGGTCTGATTTTAAC
ATTCTAACTCATATCTTGGACTCTCAAAGTAGTA
320353
320354
GTTTCCATACCGAAACGGTCTGATTTTAAC
AAAATTGTAATATTGCCTTCCTTTGATGCCCTAAA
320418
320419
ATTTCCATACCGAAACGGTCTGATTTTAAC
TCATGAATTAGTTAAAGCATATCAAAGACATAAAGATTTCATG
320491
320492
ATTTCCATACCGAAACGGTCTGATTTTAAC
TATAAGTTTGTTCAATAATACTATACCAACGCTCTAACTGCTCCCTA
320568
320569
ATTTCCATACCGAAACGGTCTGATTTTAAC
GAGTATAGAAATAAAATCTGGGGTTATTGTTACAAAAAAATTAAGA
320644
320645
ATTTCCATACCGAAACGGTCTGATTTTAAC
CAAATTCTATTTCAAATTCATAAGTGTCTCCAGACAAATCAA
320716
320717
ATTTCCATACCGAAACGGTCTGATTTTAAC
AAAACATTCATTATATAACAAAAGCATTAATTTCTGA
320783
320784
ATTTCCATACCGAAACGGTCTGATTTTAAC
TTTCATTGTAGTATCAAATAAATCATTATTACCTGC
320849
320850
ATTTCCATACCGAAACGGTCTGATTTTAAC
ATTATATATATCATTATTATATGAACAAATGAATGT
320915
320916
ATTTCCATACCGAAACGGTCTGATTTTAAC
TATGTGGAGAAAGACTTGTTGGAGAGGATATTTATGAAATAG
320987
320988
ATTTCCATACCGAAACGGTCTGATTTTAAC
AATTCAACATTTCTTGTTTTAATGTATCATCAATAGTATCAA
321059
321060
ATTTCCATACCGAAACGGTCTGATTTTAAC
TTCTGTGCATATCAATGAGAATACTTGGGTTAGTCTCCATGTC
321132
321133
ATTTCCATACCGAAACGGTCTGATTTTAAC
CTAAATCACCAAAGTTATATAGTGCTTTTATATCAAT
321199
321200
ATTTCCATACCGAAACGGTCTGATTTTAAC
TGCACCGTCAAGTTTTTCTTCAATATAAACTTTATCATC
321268
321269
ATTTCCATACCGAAACGGTCTGATTTTAAC
AAAATATGCACCTAAAAAGCAAAAAGTGAAAAAGTT
321334
321335
ATTTCCATACCGAAACGGTCTGATTTTAAC
321364
Left flanking sequence : Till position 320136 (length
bp)
GGTTATTGAAAATAGATAGATTTGATTATTTCAATATTTTTTATTTTAATAAAAAGATTTTTTGTAAAAT
TGTTATGAATAATTTTCATAGAAAATAGTT
Right flanking sequence : From position 321364 (length
bp)
AGGGCATTATTTTGCTCATTTTGTATGTTATCTCTTCTAATATTTAAGCTTTTTCATACCATAATTTTCG
AAGGGTTAATAACCCATTTTATTTATAAAC
Print the CRISPR sequence : From position
bp To position
bp