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CRISPRs details
NZ_CP009240_3
Flanking alignement tool
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NZ_CP009240_3                                                                                                                 
top
Strain :
Megasphaera elsdenii 14-14 GCF_001304715
RefSeq :
NZ_CP009240 (chromosome circular)
CRISPR id :
NZ_CP009240_3
DR consensus (32 bp) :
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
Number of repetitions :
54
Begin Position :
1557186
End Position :
1560793
1557186
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AGAGTGGTGGCACCACCATCGATGGCGTGCCTTT
1557251
1557252
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCAAAACTGTCACTGCATAACGGATACGCGTTGA
1557318
1557319
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCATCGGCGGAAATAACTTCCGGATCTTCTTCGTT
1557386
1557387
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CAGGTCAGCTCCATGTGTAAAGCCATCGCTGATTTC
1557454
1557455
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ACTATTAATGATAACGTTATGCGTCACCGTTACAA
1557521
1557522
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AATGTAGCATTTGCAAGCAATGCATATTATGTCAAA
1557589
1557590
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TTGTCTTTCGTCGGGTCGAAATCACAGATTGCCGAG
1557657
1557658
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CAAATAGTTAGCTACGATTTGAGTGTTAATGATTA
1557724
1557725
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
GACAAGCTTGACGTTTACTTTGGCCCAAATTAATGC
1557792
1557793
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AATGCCTATGGCAACCTAGAGTCTGCCAACTGTG
1557858
1557859
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AAACAGGCTTGTGTCGTGTGTGGGGAACACTTTAA
1557925
1557926
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CGAGCGGCAAAAGCGGCTGTGTTTGTCATAAGAG
1557991
1557992
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
GTAGAAGATTGCATGAAGCCTGAACGTGGGGTACAGC
1558060
1558061
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CCTTCCTCGCTTATGGTGACTATAGACTCGCTCAT
1558127
1558128
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CCTGTATCATTTCCGCGGCCTCTTTGCCCCGGAACGA
1558196
1558197
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ACACACCTGCTAAGACAAAACGAAGTAAGTATGAA
1558263
1558264
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TCAATCTCGCGCGTCTTGTGATTTGTGCCATCCAC
1558330
1558331
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCGCCGGCGACATGTTAGTAAATGCGTCAGCTAC
1558397
1558398
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
GTGAATGCGACGTAGCGCTTAAAATAGGGTCGGTC
1558464
1558465
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AAAGCCGGGACGGACGAATTGAACCCGCCGGACTG
1558531
1558532
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TTTTGTCTACTATAAAGAACACTTGTTTGGTTAAT
1558598
1558599
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TCCGTCCGTGACGCTTGCTAAGAAAGCCTCTGAAT
1558665
1558666
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TTTCCCCCACTGCTTACGAGCAAAGTAATCGAA
1558730
1558731
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TTATCATCGTATTGGTGATAGTGTTCCAGCCAAGAAC
1558799
1558800
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCGGCTGTGACCGTTTTATCGAGCGGCATGATGA
1558866
1558867
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CCCGGCCATCGTCGCGACACGATGCCGGGGATACGCA
1558935
1558936
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCGGCCCGGGACAGGAAGAGCTATCGTTTAAACTC
1559003
1559004
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AGCCTGTTCCGTTGCTGTGGGAGCAGGAGCCGCAC
1559070
1559071
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TGATGATGACAACAACTTTAGAAAGAAGCTGTTGCCC
1559139
1559140
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCAGCATCACTATTGATAATCTGATTTTCGTACTC
1559207
1559208
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATTTGCCGGGCCAGCTCGCCCCATGTCATGCCCTGT
1559275
1559276
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TACGTCATCTGCGATCAATATGTCTGCACGACTCC
1559342
1559343
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
GCCGTCGGCTACCAGCAAGTATAGAGCCATGCCGGC
1559410
1559411
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
GCATTGGGGAAGCTCCTGTTAATAGTCTGACAGAG
1559477
1559478
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
GCCAGTGTGGTGTACTGCTTGATGAAGTAGTGGATAG
1559546
1559547
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCTTCGTCAACGCTATATCCGCATCACACGGAGC
1559613
1559614
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ACTTTCGCTAACGATGCCGCCGGACGTCAGCGTCGC
1559681
1559682
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AAAACGTTGAGCGGGCCGATGAAGAGCCTGGCAGCT
1559749
1559750
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AATGCGAACTATCAGAAAGACAAGGAAAAACTGGAC
1559817
1559818
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATCCAAGTTGTCGATGACGTAAAGGGCAACGGC
1559882
1559883
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CGTTCCTGCCAAATCAATACAAGGGACTTCGTTGT
1559949
1559950
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ACCCAGCCAGGAACAATGATTGTACAAGGCTTTGG
1560016
1560017
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATACGTTAATCCTCCTTACGCACCGGGCGTTGTTA
1560083
1560084
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TCAAAGACAGCCCCGCCGGTGCCGGTGACTTCGCCC
1560151
1560152
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TTCCAAAACCCTTATGTGTATTGTCTTTCGTAAGA
1560218
1560219
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AATCGCACGCTGTCTTGATCGTGATATCGTGTAGC
1560285
1560286
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ACCTTGCTTTCGATGAACGTAATGTGCACCTTGAAT
1560353
1560354
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AAGATGATAATTACGAACATTTACACGATATTACCT
1560421
1560422
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
AGCCAACACCTCCTCATCGAAAACGCTTCCACAGCAA
1560490
1560491
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
CCCGGAGCGGTACGCCAAGTCCAGCAGCCCTTTGTA
1560558
1560559
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
TTTAAATTGGAGTTGGGGGACACGGCAAAACAGCAGG
1560627
1560628
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
ATACGGGTCCCACGTTTTATATTTAGTCGCCGTTT
1560694
1560695
GTCGCACCCTTCACGGGTGCGTGGATTGAAAT
GGCGGTCGCCACGGACACGAGTATTGAAGCGGAAT
1560761
1560762
GTCGCACCCTTCACGGGTGCGTGGATTGAACG
1560793
Left flanking sequence : Till position 1557186 (length
bp)
GCAATACCCGGAGAATTGACTCAAAAATTGAACTGCTATTCAATCAGTTCGCAATATGATTGATGAGAGA
GCAGATAGTGACTGAGCCAATTTGAAGGCC
Right flanking sequence : From position 1560793 (length
bp)
CTTATCCTGTTTGTCATCGGAACGGCCTTTTTATCGTAGTTTCGCCAGAAGACTCCTTCCTCTTAGGTAG
GGGATGAATGGCGATGGATTTCGCAGGTTC
Print the CRISPR sequence : From position
bp To position
bp