Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009302_1                                                                                                                 top


Strain : Coriobacteriaceae bacterium 68-1-3 GCF_000814825 RefSeq :NZ_CP009302 (chromosome circular)
CRISPR id : NZ_CP009302_1
DR consensus (33 bp) : GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATNumber of repetitions :17
Begin Position : 89500 End Position : 90610

89500GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATTTTTTACATAAGTAGTACACGAAATCCGCATAATC89567
89568GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATGGCCTCAACCCCCAGTATAGAAAATAAGGGTTG89633
89634GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATTTATCGACCTTGGCGGAAAGGTTGGAGAGCGTG89699
89700GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATTGGCGCTGCGCTTCCTCGTTTGCTGCGTTCGCGG89766
89767GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATTAGAGCAGAGGGCCTTTTTGGCGTCGCTGGAGCC89833
89834GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATTCCCTTCGATCGAGCCAGTTGTTGAACACTTGG89899
89900GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATCGCTCGCCCCTCCGCGAAGCGTCGGCGACTCGTC89966
89967GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATGAAACCGATTTCACGCGTCCAAAAATGCTCTAAAA90034
90035GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATCCGCCGCCGCGAACCCGTCACGCGGCTCCATTAG90101
90102GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATACCTCCTCTACCTCGTTGTTTACTCAATTGAGTAA90169
90170GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATGCGCGTCGGCCTCCCTCCGCTGGGAGGAGCTGTCC90237
90238GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATGTGCCCGACTTCGTCGTCATGAACACGCTCTTGCC90305
90306GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATCCGCAGTCGGTGCATCGTCCCTTGGTGCGCTCGAT90373
90374GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATGGAGCGTGGTGCGAGTCCGAGGGCCTGCAGATCA90440
90441GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATCTGACGGCGCTCATCGTCTACCAGGCGATCGACCT90508
90509GTCTCCCTCCTCACGGAGGGAGTGGGTTGAAATATCTGGCCTTCGTATGAGCCTTACCTATCGCGCTAC90577
90578GTCTCCCTCTTCACGGAGGGGGAGTTCCGAAAT90610
Left flanking sequence : Till position 89500 (length bp)
TTACGCTTAATGTTGCCGAAAAAAAATCTCGATGAGCGTTTTTCTTCCTAGGTAGGTCAAGATATAGGGT
CGACTAGGCTCTTTGCTACAATTTGTAGCG
Right flanking sequence : From position 90610 (length bp)
GAATGCTGGTTGAGAGTTGCATGATTCTGGAGATGTGTTCCGCATTAAAAATATTACGGAGCGCAATAAA
CCTTTTGTCTAATTATTGTGTGACGCTATA
Print the CRISPR sequence : From position bp To position bp