Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009471_2                                                                                                                 top


Strain : Marinitoga sp. 1137 GCF_001941525 RefSeq :NZ_CP009471 (chromosome circular)
CRISPR id : NZ_CP009471_2
DR consensus (36 bp) : ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACNumber of repetitions :34
Begin Position : 437248 End Position : 439803

437248ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACACCTCACGAATTTCAAATTTTTCGTCAAAACTCCCATCATA437324
437325ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAACCTTGACTTAACTCTATATACATTGATTCTCTTTT437398
437399ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTCTTTTAATTCTATATTATCATTTAAATCTATTAATAACAT437475
437476ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTCTTCTAATAAATGTTTTTCAAATTCTTTACTGAATTTAAT437552
437553ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAATTCATCACTACTGTTATTTGTAAATGTATATGTTGGAGT437629
437630ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACATTATCGACTTTTAATTGAGGCTCTGTTTTCCTCCACTCTA437706
437707ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTTTAAACTCACAATTTCGTTGTTTTCCTTCTCGAAACTCTT437784
437785ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAGTTGATAGTTATTTGCTATCTTGTAAGATATGTTCAAAAA437861
437862ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAATCTTATAATCGCTATCAAAAATAAACACATCAGGATTT437938
437939ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTGCTTCTAAAATTTCGTCTCCTGATAATCTTTCATTTA438012
438013ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTTCTGCATATTCTTTTATAAGCTTACTGTCTCCAATCGGT438089
438090ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTCTCATCTTCCCACCAGTCATATTTTTCTTTTAATTCTTT438166
438167ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTTATTTTTTTTGCTTGGTCTTTTGCATAACCAAACTCTGA438243
438244ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACCAAATCAAAATTTTTAATTTCAACATGCCTAACTTTTGCCAT438321
438322ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTATTTTTCCTTCTTTGTTCCAATATGTAGAACCACTGTG438396
438397ATCCGAATATAACTACTCTCTGAAAGAGATAGAAACCCTTCACCTACCAATTCCAATACAAAAAATCCTTCTCTAAT438473
438474ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAAGTCGATGAATTTCTTCAAGGTGCTGAAATAATAGAGCACCA438552
438553ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTGGTGTAGGTTGTTCCGAGACCAAAATACTCTACACTATCA438629
438630ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACCACAAATATATACACGCCGAAATATACGTTGGTAATGGATT438706
438707ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACGTCTCCGTATTCTTCTTCTAAGAATTCTTTAATACTCATTT438783
438784ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAGATAAAAGTATTAACAAATCAAGAAATAGAACATCTTGCA438860
438861ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACCCTTTCATACCTCACCACCTCTTTAAATTTTATTTTACAAC438937
438938ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTGCTGTTACATTTACATCTACTCCATGCTTAACGTTCCCTTG439015
439016ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTATAATCCAGCGAAATCCCTGCTTTTTCTGCAACTTCTTTT439092
439093ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAACAACTGTAACTCCATATAAATTACTTTTACTTAAAT439167
439168ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAAAAGTTCTCGTGCATCTATTAAATCATCTTTATTCA439240
439241ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTTAAGGTTCTTAGGAGGTGTGTTATTAGGTGTCTTACTATT439317
439318ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACGTCAGTGCGTATATACCAGTCATACGCACTATTCGGTGAAT439394
439395ATCCGAATATAACTACTCTCTGAAAGAGATAGAAACTTTTTTTCTTTTCATATTTTTCGAGAAGCTTTTCTAACTTC439471
439472ATCCGAATATAACTACTCTCTGAAAGAGATAGAAACAATCATCATTTGAAAATGATATCTAAAATTCAAAA439542
439543ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACATAATTTTATCTTCTACAAATTCATCACTTTCTTTTTTCAT439619
439620ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACTAACCTGTATCATCTATGTCTATCCAATTAATATCAA439692
439693ATCCGAATATCACTACTCTCTGAAAGAGATAGAAACAATTCATTTTTGAAGCAACTTATTAAATAAAAAATACTT439767
439768ATCCGAATATCACTACTCTCTGAAAGAGATAGAAAG439803
Left flanking sequence : Till position 437248 (length bp)
GATTTTATTCGAAAAAATGCCGAAAATTTCAAAATTAAAAAACAGGTTCGAAAAATCACCTTCTAAAAAA
CGCTAATAATAACCATTCTAGAAACCAGCT
Right flanking sequence : From position 439803 (length bp)
CTCCTGCATTAAAAGCAGGAGCTTTTTTATCTTTTAATCACCAAAAACTATTTTAAATTTCTCCTATAAA
TATTGACATAATAATTTCATTATGTTAAAA
Print the CRISPR sequence : From position bp To position bp