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CRISPRs details
NZ_CP009505_14
Flanking alignement tool
Page manual
  
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NZ_CP009505_14                                                                                                                 
top
Strain :
Methanosarcina sp. MTP4 GCF_000970045
RefSeq :
NZ_CP009505 (chromosome circular)
CRISPR id :
NZ_CP009505_14
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
Number of repetitions :
55
Begin Position :
2277759
End Position :
2281756
2277759
GTTTCAATCATTGTTTTAGTGGAAGCTACTTCTCGAC
AAATAATAGATGGGATCAATTACCGATAAGAGTAAT
2277831
2277832
GTTTCAATCCTTGTTTTAGTGGAAGCTACTTCTCGAC
AAATATGGCTGACGCTCTTCAGGCAGTTGTAGGAAG
2277904
2277905
GTTTCAATCCTTGTTTTAGTGGAAGCTACTTCTCGAC
TATATTAACACATACGAGCATGTAAAGAGAATGAA
2277976
2277977
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTTGTAATCGGGTCAACATCTCACACTAATTGTTATA
2278050
2278051
GTTTCAATCCTTGTTTTAGTGGATCTTGCTAACGAAT
CAGTGATAATATGTACAACAAAAATACACAACTAT
2278122
2278123
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCCCATGCTTACTCGTGCTGCAGGTCAGACTACTCAA
2278196
2278197
GTTTCAATCCTTGTTTTAGTGGATCTTGCTAACGAAT
CTGACCAAAATATCAGGATTACCAATAGATTACCGTA
2278270
2278271
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACTGCCTTATGGACAACTGGTGACGGCATTTGGTATT
2278344
2278345
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAGCTGAACGAACCTGACAGGACAGACGCGAAGAT
2278416
2278417
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TTCCTGGTATCCGTCTTTCTCTCCCTCGTAACCGAAA
2278490
2278491
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TTCATACACTGTTTGTTCCTCCGTTTATCATC
2278559
2278560
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ACGCGTTACAAGGTCCCAAGCTTCAGGCAGTGTTAA
2278632
2278633
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
AAATTCACGGAGGGCGCTCAGGCTCTCGTCGGGTA
2278704
2278705
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ACCGCACTCACTGAGGTAGCCATGAGTCAGGACGT
2278776
2278777
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GGGTGTGAGTTGGAACCTTCTTTTGCATTGAAATGT
2278849
2278850
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
AAATTAGAGTTGTATCGACAAGAGAAGAATTACATC
2278922
2278923
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GCCATTCTAGGTGTGGCGATTATTGGAAAGGAACTGA
2278996
2278997
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GCCATTCTAGGTGTGGCGATTATTGGAAAGGAACTGA
2279070
2279071
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TTATTCCAATGTCAAAGGCCACTTTGATGGAGGATGA
2279144
2279145
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CCGGGGATTTCTCGGGAGGAAAGGGAGAAGTTGGA
2279216
2279217
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ATAGGCGGTTGCATAGGCATTATAATCTTTGTACCTC
2279290
2279291
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CGGTGTTAAACAGTTAGAGAGATGATGGGATACTCCA
2279364
2279365
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TCATACGCGGTTGCGGGGGATAGTGCGTATTTGCGGT
2279438
2279439
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CTGAATCCGGCATACCGTCTACAAAATGGACCGATG
2279511
2279512
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CTGCCGTCTGGCATGGTTTCCACGTGCTCGAAATCTT
2279585
2279586
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GGGGGTGTGTTGTTCGGGGTCATGTCGTATCCTGAA
2279658
2279659
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TACAGCAGCACCTACGCCTGCGGCGATTACACCGGCAGGCCCAAATTTA
2279744
2279745
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CGGTCGGGAAGCCTGCCCCAAACTTGATTTTTTGG
2279816
2279817
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CTCTCCGTTTCCCGTCCCCGCTTAATAGCTGCTGGA
2279889
2279890
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GTTCTCAGTGCGTTTGTCACGGGATAACCTGATTCT
2279962
2279963
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TCTTACTGTATACTCTACTATGCAACCTAAACTA
2280033
2280034
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TTATACATACATATACATATACATATACAATACTTACTCTCTA
2280113
2280114
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GATCTCCCTGCAGTCTTCCAAAAATTGCAGGATTTT
2280186
2280187
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ACGTGGACCTCGGGGCCACATATTCAAATCCAACTA
2280259
2280260
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TCAGCCCCCTACCCTGCAGTCGTGGAATGAGAGTGT
2280332
2280333
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CTGAATAAAATCTGTGATACTTTTCACGATGAAT
2280403
2280404
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TTAGCCCCTTTTGAGTACCCGAAGCCGCCGACTGC
2280475
2280476
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CTCAGCCGACTACGCCACCACACCAGTACAATACAG
2280548
2280549
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
AGGATATTTGACCAATAGTTCACCCTCCAATATTTT
2280621
2280622
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CCGTTTTCGAAGTTTTATATGAACCGTGGTATAAA
2280693
2280694
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TCATTGATTTTTGGGTCCGTGTCCGGTTGCCATGCT
2280766
2280767
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CCGGGATCATTGACAGAATAGACTGTGGAGTATAT
2280838
2280839
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TTTTATAATCCTGATATTTCCGGAAAATTGAAGGCT
2280911
2280912
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ACGCATCCGAATGGACCGACGTGGCCACCAAGTGGA
2280984
2280985
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
CCTATTGAAATATGTCTCAGGCAGGGACACACAGAAC
2281058
2281059
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ACCAACATCCGGAAGAATGGCATAACCCGGATTTCAA
2281132
2281133
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ATCACAAATGGGTTAAACTATGAATCTCTCAAAAGA
2281205
2281206
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
TGTATGAATTTATGAGAGAAAAAGGGGAATTTTGAC
2281278
2281279
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ATTTCGGGTCGATGGTCCTGAAAGTAGGCGGGACAA
2281351
2281352
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
AAATCGTTATTATTTCCCGTGGGAAAATAGACCCTCTAT
2281427
2281428
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GGCCAAAATCCCTAAATGCCTACTCCCGGAAGTGATC
2281501
2281502
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
ATAGATAGCTCGGGCAACGGAAACAACGGGACGA
2281572
2281573
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
GCCTTTGTCCCGTCCGATGTGTATATACCATTCCGG
2281645
2281646
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
AAAAGGCACTCATGCTGCAGGGGACCGGATCAAACGG
2281719
2281720
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCAAGAAT
2281756
Left flanking sequence : Till position 2277759 (length
bp)
TCCATAATTTAGTATGTCGATCCCAGAGGCTCTGTTTCATCCCAAAATGATTTCCTTGATCTGCCTGAAC
TTCATATCCAGTTCTAATCCTTGTTATAAA
Right flanking sequence : From position 2281756 (length
bp)
ACCGCGAATTTTTGCCTGTTTTTAGCCAAAGGAGGCCTGAAAAGGGTCCTTTTTTAGAGCTAAATTTCTT
GATGGTAATTTATCAAACCCTTTATATAGA
Print the CRISPR sequence : From position
bp To position
bp