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CRISPRs details
NZ_CP009506_4
Flanking alignement tool
Page manual
  
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NZ_CP009506_4                                                                                                                 
top
Strain :
Methanosarcina siciliae T4/M GCF_000970085
RefSeq :
NZ_CP009506 (chromosome circular)
CRISPR id :
NZ_CP009506_4
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
Number of repetitions :
25
Begin Position :
2338844
End Position :
2340662
2338844
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
ATCAGGGTACCAAAAGGAGAGATTCCCAGAAATGGGG
2338917
2338918
GTTTCAATCCTTGTTTTAGTGGCTGTTACCGTTTTTC
TGACATCACGAAACTTGGATCACTGCTCAAAATTTATAAAAAGCTGTACAAAAAGGATGTATTC
2339018
2339019
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TGAAGAGTGCATAAATTCTATAATTATTGTGAAA
2339089
2339090
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TTGAATGAACAGTTGAGGATAATAGCGATGTTTATAA
2339163
2339164
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CATTGAAGTATCAAGTGTTTGTGCATATTTTCTA
2339234
2339235
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TTGAGGTTGAAGATCTGACTGTGAAGGAGGGCTATAT
2339308
2339309
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TCGGAAACAAAATGGATTTAATTGGCCAAGAAGA
2339379
2339380
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TTGTCATCAGAAAATCTTGATGAACAGCTTGATA
2339450
2339451
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CTGTAATAAAGATTTCTGCGAGAGAGATAGATACTGA
2339524
2339525
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
ATCGGTGATGGAAAGGATTGCTAGAATTGATAATAAG
2339598
2339599
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CTGGAAGATTGATCATCACCCAGAAGAATCGAGAGAT
2339672
2339673
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TAAGGGGCACACGGTTGTTCCTGTCGAAGCAGAAAAAC
2339747
2339748
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
GAATAATTACGCAAGAAATGGAAGATGGTTACAAGA
2339820
2339821
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CGAGAGATTGAAACAAGCAGAGGAAGACAATAAATTT
2339894
2339895
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AAATTATCTTCGGTTTTAAAGCTAAAAATAAATGAA
2339967
2339968
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CGTGTATATCTCAAGGAAGAAGGAATGGAAAACCCA
2340040
2340041
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TTTTGACCAAAGGACTAGCTCATGTAGTTATATTTA
2340113
2340114
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AATAAAAGTCTAACCGTGATTGATATCATTGATAAAG
2340187
2340188
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
CAGAGACACTTGTGTCTAGGGGAATGAGAGTGTCAG
2340260
2340261
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
GTAAAAACAAAAACGGAGTGCAAAAAATGGAAAA
2340331
2340332
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TGGCAGATATAGATCCCAAATTTTTCGAGAAAACAA
2340404
2340405
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
AATCAAGAGATAAGAGGAATAACCGGATCTATACTG
2340477
2340478
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
GTGGAAAACACTGGTTTTTTAAAAAATACAAAAAGAG
2340551
2340552
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
TCCCATATCTGGCACATGGAAAAGTTTTCCCAGAAGA
2340625
2340626
GTTTCAATCCTTGTTTTAGTGGCTGTTGCTGTTTTAG
2340662
Left flanking sequence : Till position 2338844 (length
bp)
TACTTAGCCGCGAAGAATTCGGGTTTTTTCCGAATTAAAGGACTCGATACTTTTTCGTGATTTCAGTTTT
TATCCACGGAGGTGGAGTTTATGGATATTA
Right flanking sequence : From position 2340662 (length
bp)
AGGGTCGTTTTCCCTTATTTACAGCAAATTATTAAATAATTCCAAATCTAAAAAACAATAGCAAGCAAAT
TATTTTTTGCTTAAACTGTATAATATTTAA
Print the CRISPR sequence : From position
bp To position
bp