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CRISPRs details
NZ_CP009512_3
Flanking alignement tool
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NZ_CP009512_3                                                                                                                 
top
Strain :
Methanosarcina mazei S-6 GCF_000970205
RefSeq :
NZ_CP009512 (chromosome circular)
CRISPR id :
NZ_CP009512_3
DR consensus (37 bp) :
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
Number of repetitions :
61
Begin Position :
901787
End Position :
906212
901787
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CTAAATTTCATACTCTTCTTGATTTTGGGAAAGTAA
901859
901860
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATACAAATAGAGATAGATTAGATAAGTATAATGAT
901931
901932
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATTTGCATACTTCTCCTACAGTACCGCTTCCGGCAAA
902005
902006
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AAATTGAAACCGCGATAGGCTACGGGTGGATTGAAAA
902079
902080
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
GTTATTTTCAGGAGTGGTTTTCGCTGTCCATGTATC
902152
902153
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TATTATATATTACTTTCACGTAGGTAAAATTAGTTAT
902226
902227
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AAAGGAAAAAATTAGTATTGTCTAGGAACTCAATTA
902299
902300
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTATCCTTCTGAGGATTAGGCTTGTCCCGTATCAC
902371
902372
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATAATGAAGAAGCACACACGAAAAGGTGTAAGCCAT
902444
902445
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTAACTTGCCAGACTGAACGCTTATTTCTAGTTCC
902516
902517
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AAAATAGTGCCTACCGTACCGCCCATTGCAGA
902585
902586
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTAAGATGTGATGGGAACCTGTGATAATTTATTACT
902658
902659
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CTTGATTTTGATCAGGTTGAAGAACCCCATAACGGGT
902732
902733
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TACCTGTCGTGGAATCTGGGAATTCCTGGATTATC
902804
902805
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AATTCCTCGCATAGTGTAGAAAGTGGATTTACTATTACTGT
902882
902883
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTTTATATATAACGATGTTTTGTCTGGATATTCAGA
902955
902956
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AATAGATACTGTCTTGCTGTGCCTCCTGTAGCTGT
903027
903028
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATAGATATCGCACGGTATTATGTTAATGGGGAAAA
903099
903100
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATGGCCGATGTTGGAATGGCAACCGCCGACATGACAG
903173
903174
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
GGAGATATTAGCCCAGGTTGGCGAAATGTACGCGTGG
903247
903248
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CGTAATGATTCCGATCTTCAGGCTATTATTTCGGCTGT
903322
903323
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TATTGGAGGGATAAGTGGGGGCATGGTTATTATTCC
903395
903396
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ACCCTCTCAACGCTAACTACTTCCAGGATCTTATCAAG
903470
903471
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CAATCAGGTTATTATTCAGGAGTCGCAGGGAGAAGA
903543
903544
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
GAGAATTAACAGACTTTCATATCTATGAATCAGAAA
903616
903617
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CCAAAATCTGAACATTATTATTCTGCTCTGCTGCAT
903689
903690
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TATGGCAGTCTTGCCATCAAACTGCCTCCTTCGGGC
903762
903763
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTTCATCTGACCACATTTATAAAAAGTATTATTTCTT
903836
903837
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATTCAGTTGAGGATTCTACAGAACAAAACCCAGTTTG
903910
903911
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ACCCTCTCAACGCTAACTACTTCCAGGATCTTATCAAG
903985
903986
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
GTCAATCTCAATGTTGGCACACATTCCGTAGTGAT
904057
904058
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AATGAAACGTCCTTATCTATAGTCTCAACGTCACC
904129
904130
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AAATTGTGACCCCGGTAACAGGAATTGCCCTTGTTT
904202
904203
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TCATTCTCGGGGAAGTCTTCAAGCGAAGCGGGCTTA
904275
904276
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATATCATGATCAGGATTGTAAACGTCCGGCTTGTAG
904348
904349
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TAAAACATGGTATAATAAAGATCTCAAATTAAGCGA
904421
904422
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTTTGTATTGTCCTCGTCTCGCGGATCGAATGCGTA
904494
904495
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTTTCCCTATGTTCTTAAAAAAGTGAGTTGTCAA
904565
904566
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTAATTTTGCCACGTCATTATATGACTCGGTTC
904635
904636
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
GAAACTGACAATAACTACGGAAAGGGCCTGAAAG
904706
904707
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CTGTCCTCCCTCGACTTGTCGAAAACGGCGCAGAGG
904779
904780
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTTCGGATGTTGAACATAACAAAAGCATTACAGGAAA
904853
904854
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
GAACAATAAGTTATGACAGTTTCGATCAAAAAATTAT
904927
904928
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TCCGTAAAAATGGATAGAACTGAAAAAACTGTATGG
905000
905001
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ACATCTACGATTAACTCATCATCTGAAAGCAGCCGC
905073
905074
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTTCTCCTGGCAGTCTTTTGAACAGTATACATCTGCC
905147
905148
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CAATTTGAAACTACACAGTTCTTAGAACCATCATAC
905220
905221
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TCCATGGTTGAGGATGGGCAGATTAGAAACATAATA
905293
905294
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTCTCCGACAATTTCAAAGATATCTGAATTTCTGAG
905366
905367
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
AGTAAAGGGGTGCTGTACGAGAGGGTAAACGGGAAA
905439
905440
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CCTTGATACTCGGCCTCTTGATCCAAAAAGAAAACA
905512
905513
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TATTTTATTGTAAGGGGTACGGATTCATAAGGGGTAT
905586
905587
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
GAATAAACCAAACGTTGTAATCCCCGCATACCAGTAC
905660
905661
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTGCAATATCCGCGAGAAGAGAGGAATATACTAGG
905732
905733
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
CTCTGGAGTCCTCATGGCCACTTACAAGGGAGAATA
905805
905806
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TACAATTCCTTTCCCTAGCGCCGTCTGTATATCCAA
905878
905879
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ACAGGAATTTCAAATAAGCCCTGCCCTCCTACTACATA
905953
905954
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TATATGGTAATGTAGTTTTAGAAACCACAGGAGGAA
906026
906027
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
TTGAATTTACTGAAAACTACGAACCGATTGTTTTTAAA
906101
906102
ATCGCAATCGGTTAGAAAACTCGTTAGAGATTGAAAC
ATTAAAGTAAAACACGAACGCATGAATGCACTAATAG
906175
906176
ATTGCAATTGATTAGAAAACTCGTTAGAGATTAAGAG
906212
Left flanking sequence : Till position 901787 (length
bp)
TGTTTATATATTCTCTGTACGCAAGAGGTTTGGGAATTAATGATTATTTTTTGAGGTTTTAGAAAGGGTT
ATTACGAAAAAAAACCCTTATTTTCATGCC
Right flanking sequence : From position 906212 (length
bp)
CCTATCCGAAAAGTGTTGTGACCTGTGTAGATGTCCGACACTAATATTTATCGAAACTTCTATAACAGCC
AATAGTATATCCTAAGTGTGGTAAAGAGTC
Print the CRISPR sequence : From position
bp To position
bp