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CRISPRs details
NZ_CP009515_20
Flanking alignement tool
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NZ_CP009515_20                                                                                                                 
top
Strain :
Methanosarcina lacustris Z-7289 GCF_000970265
RefSeq :
NZ_CP009515 (chromosome circular)
CRISPR id :
NZ_CP009515_20
DR consensus (37 bp) :
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
Number of repetitions :
42
Begin Position :
2985348
End Position :
2988430
2985348
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
CTTATTATCTTTCCTGCGAAAGATTCTATATAATTGTCCTC
2985425
2985426
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TTTTTGTTGATTATTGGCACGATTAATCCTCCTGATTTCAA
2985503
2985504
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TCATCGCCTGTGTTGTCATCAACAACGTCGTCATC
2985575
2985576
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TTCATCTATTGTCAAAGGATATTCTCCCGTTTCTTTTGTTTA
2985654
2985655
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TCCAACCAAAGAGCAACTTCGTTACGTTCAACCTTA
2985727
2985728
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TCGAAAATCCACTCTTGGTGGGGTTCGTTTCTCTTAA
2985801
2985802
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TTTTTTTCGCAAAGCCAGAACCAACAAGCCTGACCGA
2985875
2985876
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TATCTGCGCCGTCTGTTAGCATTTTAGCGACTGTA
2985947
2985948
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
ATTCTATACTTTCTTCGAAAAATCCATATATTAACA
2986020
2986021
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAA
ACAGCTTCCAGCAAAACAAGGATTGAAAAACAGGAACCCAGTCTTCTGGATTTTCCTCTCCTATA
2986122
2986123
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
AAGAAGTCTGTGGATCTTTATCGAGTTGGGATTCCGGC
2986197
2986198
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TTTCCTCTTTTTGCACAATTTCCCTAGCGTCTGTGAAA
2986272
2986273
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
CTTGTCCAATCACCGCTTTAGCTTTCTCGATACCC
2986344
2986345
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
ATTCTCCGTTGTATCGCTACAACGGTCGAAGCTATA
2986417
2986418
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
TGCAGTCAACCCGAATGGTCATTGCTGTTCCAAATA
2986490
2986491
GTTGAAAAACAGCTTCCAGCAAAACAAGGATTGAAAC
ACCAGTTAACCGCCCGAGACTTCGAAGCAATGAAGGC
2986564
2986565
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AATGCCGCATTTGATCGCACATGATCTCCCACACTAA
2986638
2986639
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AAAACATAGCTTTTTTTGCATTGTGACCAAAGAAGC
2986711
2986712
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AAACAAATCGGTTGTATACTAGCATTGTGTATGATGT
2986785
2986786
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATTTTCGTCTTGCGTTTTCTACGTTGAGACTAGCTT
2986858
2986859
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AGCGTCCTTACCTTGTACATTCTGCGCCTCTCCT
2986929
2986930
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAGTAAGAGAAAGGGCTGATGGTCGTGGAGGACTCAG
2987003
2987004
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AAAATATGGCTACACCGATAGGTTTTAACGAACACGG
2987077
2987078
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAAGATAGGAACGTTCCACAAAGCGGAGATATAATA
2987150
2987151
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CTGTCTCCTGCGAGTCCTTCGTCTTTTGGGTCCTTA
2987223
2987224
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CTTCTTGTTCTCTATATTTTTCAAAAGTGTCTTGTA
2987296
2987297
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAATCTCAATTAGTTGTTCATCAGAAAGAGTATTAA
2987369
2987370
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TACAGTGTCTTGCCATCGATTCTTATCTGTTTGGTT
2987442
2987443
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ACTCACTGACTCCACATTAAACAATCAAAAAAGAG
2987514
2987515
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAGCTCCTGTAATCTTCTGTAGCCAGGTAGTTTCTG
2987587
2987588
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AACAGTTAAGTGCGCGACCTCGTCTTTTCGCCGTACTG
2987662
2987663
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CCACCGATAAACCCGCCAATAACTCCGCCTGCCGCGC
2987736
2987737
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CACCTTCAGCCCTGAGGCCTCTCTAACAAAAGATTA
2987809
2987810
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AGAGGGAGGGGGTAAATTATGATAAACACCAACAAC
2987882
2987883
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CTCACTTTTTATCTTTGAAAAGATATACATCTATT
2987954
2987955
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTTCTAATTCTTTCAAAAACAATTTCATATTTCTTT
2988027
2988028
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAATATCCAATTGTTTGTTCAAGGTCTGAAATTAGT
2988100
2988101
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATAATTTCATTTCGGGAGGGGCAACCTTATTTGGAT
2988173
2988174
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
GTTTTCTTCTCTATGTGGTCCTGGTGGCTCCTATTT
2988246
2988247
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
AATTTCATCGGAGTTAAATGTCAATTTAGGCATTAGT
2988320
2988321
ATTCGCGAGCAAGATCCACTAAAACAAGGATTGAAAC
CATATCTTTTCAATCATTTGGGGCACGTTTTCCATG
2988393
2988394
ATTCGCGAGCAAGATCCACTAAAACAAGGTGTATAAA
2988430
Left flanking sequence : Till position 2985348 (length
bp)
CTAGTGTAACAGGGAGATCAGCGGAAAATGCCTAAATGGGTATGCGGAAAAAATTGCTCTATTTTGAAAA
TAAAGGCTTAATAGGGCGTTTTGAAACCCT
Right flanking sequence : From position 2988430 (length
bp)
AACATTTTAAAAATACTCTTTACGCGAGAAATATGGCCGGGAAGATCACCTACCTTGATGGGCTGCGCGG
TATAGCTGCGGTTAATGTTATGATAATGCA
Print the CRISPR sequence : From position
bp To position
bp