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CRISPRs details
NZ_CP009516_6
Flanking alignement tool
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NZ_CP009516_6                                                                                                                 
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Strain :
Methanosarcina horonobensis HB-1 = JCM 15518 GCF_000970285
RefSeq :
NZ_CP009516 (chromosome circular)
CRISPR id :
NZ_CP009516_6
DR consensus (37 bp) :
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
Number of repetitions :
20
Begin Position :
2392664
End Position :
2394112
2392664
TTTTCAATCCTTATTTTAGTGGAAGCTACCTCTCGAC
CAGGAAAAATCGAAGGAGGTGAAAGAATAGGATGCCACAG
2392740
2392741
GTTTCAATCCTTGTTTTAGTGGAAGCTACTTCTCGAC
GCACTAAAAGAAGATTACCAAAAAGAAGCTGAAAAGGA
2392815
2392816
GTTTCAATCCTTGTTTTAGTGGAAGCTACTTCTCGAC
GAGGAAGGTGATATCGTCTTTGTTGACGTATTGAAAAG
2392890
2392891
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
GCATTATATTTGAATAACAACAATATTTCTTTAAAGAA
2392965
2392966
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
CCATAGAGAAGAATTGCTTCGCTCGGGAGATTTTA
2393037
2393038
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
CGTTTGAAGCAAGCGGTGCGAGCGTAAGAATGAGG
2393109
2393110
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
TATTTTTGATAAAAACGGCATAAAAACAATCGAAGAA
2393183
2393184
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
CAGGGAAAAATAATAGAAGAAGCTATTGATATCGGAA
2393257
2393258
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
GAACTTCTGAAATGCGGAGAAGTCCTGGTTATTTCT
2393330
2393331
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
CTGGAAAACTTATTACTTTAAACCAGACAGACATG
2393402
2393403
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
GAAAGAAGAATCCAGAGTACAGGCTTGCCCGTTTCAA
2393476
2393477
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
CTATGGTCGTAGCTGTACAGAATGTGAACATCCACTGTAG
2393553
2393554
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
TATGACAGAAGAAGCGGTCGATAGCATCAGAGAAAATT
2393628
2393629
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
CTAGTAGAACAGATAGCGAATAAAGCAAGAGCAAATA
2393702
2393703
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
GAAAGAAATGAGAACCTTCCCGCTAAAAGCAGCGA
2393774
2393775
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
TGGAATGCTTGATGATCAAGCGGATGCAGCTCTAAAGGAAGCAGTG
2393857
2393858
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
TTAGAAGTAGAGGATGTTTATGAGCCTCTAGAAAA
2393929
2393930
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
AGGAATACAGAACCAACGCCAGATCCATTTGAAAAG
2394002
2394003
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
TCCGAGAGTCTGTGACATTACATCCAGAATTTGCGA
2394075
2394076
GTTTCAATCCTTATTTTAGTGGAAGCTACTTCTCGAC
2394112
Left flanking sequence : Till position 2392664 (length
bp)
ATATACTTAGCCGCGAAGAATTCGGTTTTTTTCCGAATTAGAGTTGCTGATACTGTTTTTTAGGAGATCT
TTTCAAAAAAATTATTAGTGCAGGGGATAA
Right flanking sequence : From position 2394112 (length
bp)
AGGGTCGTTTTCCCTTATTTTCAGCAAATTATTAAGTAATTTCAAATCTGAAAACTAATATCAAACAGCT
TATTTTTCACTTTGACTGTCTAATATTTGG
Print the CRISPR sequence : From position
bp To position
bp