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CRISPRs details
NZ_CP009517_26
Flanking alignement tool
Page manual
  
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NZ_CP009517_26                                                                                                                 
top
Strain :
Methanosarcina barkeri 3 GCF_000970305
RefSeq :
NZ_CP009517 (chromosome circular)
CRISPR id :
NZ_CP009517_26
DR consensus (37 bp) :
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
Number of repetitions :
99
Begin Position :
3729889
End Position :
3737068
3729889
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TACAGCCTGTACAATCAGAACTAGAAGCACATTCTGA
3729962
3729963
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTTTAAGTTATCTGATGGAGCTAAAGAACTGATTA
3730035
3730036
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAATTTAGTTCTAGAAGAAGCAATTAAAAGAGGCAG
3730108
3730109
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAAGGTATAGGTTTCTGTACCGATTGAGTGGTATT
3730181
3730182
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGTTTTATCGTACCGTTGTCGTCTTTTAATCCGG
3730252
3730253
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTACTTTTATTTAGTTATGTAGCGGCTGCTGCTACG
3730325
3730326
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAATTGCAGCATCTTCAGTTGCAGTTGCCGAATAA
3730397
3730398
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCACCTTCAATCAATTATTAAGTAGTCAATCACTT
3730469
3730470
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATAACAGTTCCATATTTTGAGAATGTTGTGTGCCAG
3730542
3730543
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCTCTTATAGAGTTAAACGGTGGAGAGCATAGGATT
3730615
3730616
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTACTAACGGGCCTATAGAAATTCCATCAGGAAA
3730686
3730687
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTCCGTAGTTGGAGATATAGTCGTATACCGTCATCGTG
3730761
3730762
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTCCTGGTGGTGATCCCCTCTGCAAATGGTTAT
3730832
3730833
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTATGTGTCTGACAGTAAGTAAATGTGAAAAAAATT
3730905
3730906
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCCCTTCAGAACGTGGTTCTCTCGCAGAGTTTTTGA
3730978
3730979
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CGGAGATGTGCATACTTCCCTCTAACGTTTTTAATT
3731051
3731052
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAAAGTATGTGGCTGGCGACGGCACAGGTGATTATGA
3731125
3731126
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCCATCATCTTTCGTACTCGTTCCCTTTCATCTTC
3731197
3731198
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGCGCATTCTCTCCGGCAGTTTGCAGCATCGTAAT
3731269
3731270
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAACAAAGCCATTATAACCGCAACAGTAATGCCAA
3731341
3731342
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAGTACTGTTGAGCCACTACACTTTGAATATGAAAT
3731414
3731415
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CATACTTTCTCGGCAAAGTAGTCTATACCAGTCTTT
3731487
3731488
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCAAATATCTTTTTCTTGAATGCAAAAACCGAAAT
3731559
3731560
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAATATATACAAGTTAATTACGAAGTATCTACTAA
3731631
3731632
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTTTAGCTATCAAGTCTTTTGTTTCAGATTCCTTAC
3731705
3731706
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAATTTTTCACAGGTGTCAAAAAAGACGTAACAA
3731776
3731777
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CACAGACTATATAAACCATAGTTATCTACCATCCAT
3731849
3731850
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATCATCCTCTACTTGCTCAGTCTTTCTGCTGGTTTT
3731922
3731923
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAAAATCGCAAAAGGTGCATCAAGAATCAAAGGC
3731994
3731995
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAGATTCAATTTCATATCGAAAGTTAGAGAACG
3732065
3732066
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGAATTATTCCCTGAAGAATTCGACTATCTAGAAGGAG
3732140
3732141
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CACCAACCGCCTACAAGCTCTTCAGGGAGTACCAT
3732212
3732213
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CACAAGCGAAGCAGGCAATTCAACAACTGATTTCA
3732284
3732285
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTGATTGGGATACAACGTTAAAATTTCTTGAAAC
3732355
3732356
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAAGAAAATGAAATCAGAATAAAAGAGTTGAAGC
3732426
3732427
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AATTTTGAGCGTTCTTTCATCACTCAACCTCTGAACAT
3732501
3732502
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATAATCATCTGACATTTTGCCTACTCCTTAAAAGAA
3732575
3732576
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAGGATAGCAGACTTGCAAGCTGTGCAAAGAATCAT
3732649
3732650
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATGAAAATCAGGAAGCCGGGGGTGTATATTCAGATGA
3732723
3732724
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAAAAAAGCTAACGGTGCATCCAGAATAAAAGGGGT
3732797
3732798
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCCAATTAATAGCCCTCCGGTAAAACGGTTTTTGACC
3732871
3732872
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTTCCGAGTGGTTCGGAGCCAGGGACTTACAGGAGT
3732944
3732945
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTGCAGGAAAACAAAAATAATTTCTCTTTTTTATT
3733018
3733019
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTATTATCGTTGTATATATCATATGATTACGGACAC
3733091
3733092
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGGAAGAGACGGGAGCTATACATCAACAATAGGTTA
3733164
3733165
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAAGTCTTTAGTTTGTGATTCCTTACACTTAATGA
3733237
3733238
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATCACCTTCATATTATACTTATCAATTGTAGATCCA
3733310
3733311
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGGTCTTGGAGATACTTATTTTCTGTTTCTGTAAAT
3733383
3733384
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GACAACCGTGGGCTTCTTTAATTATTGAAGGATTAA
3733456
3733457
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATGCTTATTATGTATTGTAAAAGGGCGAGTGCCCAACG
3733531
3733532
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCATATGGAACCCACTTGATATAAAAATGAAAGATCCT
3733606
3733607
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAATGTTTTCACTAATTCTTCCAAATTGACGTCAG
3733678
3733679
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGCGCAGGAACTCAAAAAATACTCGACGGAAACGTT
3733751
3733752
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTGAATGGAAAAATAGACTGGAAAAACTTAGCGAAA
3733824
3733825
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AACATATAGTGCTTGACAAGACCAGCAAAGGCAAAGG
3733898
3733899
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGTCTTCAGTCATGATTTATCTTCCTCGTAAGCTTC
3733971
3733972
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCGAGTAGGATCTCCTCTGGATAATGCTCAGATACTC
3734045
3734046
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATCAAATAATAGCAGAATCAACAAAAGAAACACAA
3734117
3734118
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAGTCTATTTTTCATGCTCGTGCGAGAAGTGCTGAC
3734190
3734191
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACATTTTCAAGGAATATAATTTCGGGTCTTTTTTCT
3734263
3734264
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAGCTTCCAATATCTCATCATCTGTTACAACTT
3734333
3734334
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTCGAATTACGGTAACTGACGCCAGCATTCAGGCT
3734405
3734406
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAGTTTTCTATCAATGGCAATATAACAGTCAACTC
3734477
3734478
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCCATCGTTGTGACAACGAAATGATCAAGCTTTGTA
3734550
3734551
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GATAAAGAAGGAAACACGTGCATTTTAGCATATGCT
3734623
3734624
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACTCGAATTCAACTGCACGTTCCGCATCGTAAAAAT
3734696
3734697
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTCAATCGAATTTGATTCATCTGATAAGCTCTTTCC
3734769
3734770
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCTGGATCTCTAAAGGTTGTAACGTCCATACCCCCG
3734842
3734843
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTTCATAATTCCTTTGAGAATCTGCCCGTACACA
3734915
3734916
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAAATGTAGTCAATAATACAATTCTTTCGTCTT
3734986
3734987
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAAATAATAATATTACAAACGGTATGGGAATCAGG
3735058
3735059
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTAGAATCAATTAACTTTCAGTTCAGGGGCCTCT
3735129
3735130
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAGTATAAATACATACCATATGCAGTATAAAATATAA
3735203
3735204
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGGCAAGCTCTACCAGCAACAAAAATAATTAAAAAA
3735276
3735277
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GCGACTTAAGAAGCTCTTGCCCAATCTGGAAATTAAG
3735350
3735351
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTCGGTGAATATCCCAATATTGGGATTAATGCTTATG
3735424
3735425
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTCGGTGAATATCCCAATATTGGGATTAATGCTTATG
3735498
3735499
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAGTAAAATATATATCATGAATCTGCCCTGCCTGTAGT
3735574
3735575
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAATAGTAACATAAGAGGTTTGAAAACAATGAGCAAA
3735648
3735649
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGGAATCCACACCTTACAAACTTCCTCCTCGATACTGT
3735723
3735724
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAGAGGAATTACTACAGAAATGGGGGTGGAACCAATG
3735797
3735798
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CGGCAGGATCTTCAGCTATCATCTTAATATCTGCC
3735869
3735870
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCTCCGTCTTCAACTAGATACAGGATATTTGCTTTA
3735942
3735943
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAGGTTATGCCGTCGTCTATAGCGGTGCAATGATCT
3736015
3736016
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CATTTACTTTCTAATTTAGCCTTAAATTTTCCAAA
3736087
3736088
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGAATCCTCTGAAAAATACAAAGTAACAGTCTT
3736157
3736158
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTCCTTACTTCAATTGTTTTCAATCCTTCAACAATAA
3736231
3736232
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGAAAATCATCCCAAGTTCTAAGGTATGACTTTCCATT
3736306
3736307
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACATCCCTGCTGATCCTCTACGTACTTCAGCCAGTC
3736379
3736380
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTATAAAGAGTTATTATCTAAAGGGCAAATCAATG
3736451
3736452
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
CTATGTATCAAACAAACCTACTAGACGGTGATGTA
3736523
3736524
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTAATTCAGCTAGCATTTGTGCTAATCAACCTAACCG
3736597
3736598
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCTTATAGTGCTGGCTCTAGGTGTCTTATGTCTG
3736668
3736669
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATGGTCAAATAATAGAGTAACCGGTTTTGTTAGT
3736740
3736741
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
GGGGTTTTCGTGATAACTTGCCCGGAGAAAAGCATA
3736813
3736814
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAATTAAAGCTGTTCCAGTCATTGTATACCACCAT
3736885
3736886
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTCGATGCTGGGCTGATGTCAGCCAGGGTTAACCCCAT
3736960
3736961
ATTCGTGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTATTTTCTTTTCCTTCTTCTATAGAAATTATGT
3737031
3737032
ATTCGTGAGCAAGATCCAATAAAACAAGGATTGAAAC
3737068
Left flanking sequence : Till position 3729889 (length
bp)
GTATTTATAAAGGGTTTGATAATTTTCCAGCAAGAATTTTCGCCCCAAAAAAGGGCTTATTTCAGAGCTT
TTCTGGGCAAATAGCGGAAATTTTTGCCCT
Right flanking sequence : From position 3737068 (length
bp)
AAATGAACGCATACTTACAAAGAATACTAACAAACCATTTTAGTAAATTCTATTAGAGTCGATCCTATGT
TGAGTTAGATATGTTAATATTCTGTTATAA
Print the CRISPR sequence : From position
bp To position
bp