Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009517_3                                                                                                                 top


Strain : Methanosarcina barkeri 3 GCF_000970305 RefSeq :NZ_CP009517 (chromosome circular)
CRISPR id : NZ_CP009517_3
DR consensus (23 bp) : ACTGCTGGTGCAGCAAATGCAACNumber of repetitions :6
Begin Position : 40616 End Position : 40930

40616ACTGCTGGTGCAGCAAATGCAACTGGCGCCCTTACAAATGATCCAGCAATCAATCAG40672
40673ACTGCTGGTGCAGCAAATGCAACCGGCGGCGCCTCTACGTCCAGCCTGATAGCTAATTCA40732
40733ACTGGTGGTGCAGCAAATGCAACTGGTGGGGCTCTCACAAATACTCAGACAGCCAATTCA40792
40793ACTGGTGGTGCATCAACTTCAACTGGTGGTGCCTCTACGTCCAGTCTGAACCAA40846
40847ACTGCTGGTGCAGGAACTGCAACTAGCGGCGCTCTCACAAATACTCAAACAGCCAATCAA40906
40907ACTGGTGGTGCGTCAACTGTAAC40929
Left flanking sequence : Till position 40616 (length bp)
AGTGAATACAACAAGTACAGGTGGTGCAGCAACAGCAAATTCATCTAGTATAGCAAATGCAACCGGTGGC
GACCTTACAAATGATCCAGCAATCAATCAG
Right flanking sequence : From position 40930 (length bp)
GGAACCAATACAGCCAATCAGACAGCCAGTGCAACTGGTGGTGCAGGAGGATCTGCAACTGTTGGAGGCA
ATACAGCCACTGTAACAAATAATCAAACTG
Print the CRISPR sequence : From position bp To position bp