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CRISPRs details
NZ_CP009575_1
Flanking alignement tool
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NZ_CP009575_1                                                                                                                 
top
Strain :
Listeria ivanovii subsp. londoniensis GCF_000763475
RefSeq :
NZ_CP009575 (chromosome circular)
CRISPR id :
NZ_CP009575_1
DR consensus (36 bp) :
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
Number of repetitions :
96
Begin Position :
534160
End Position :
540461
534160
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TTACAGAAAAGAATGGGCACTGGAACGCCT
534225
534226
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TAATGTTTCAGAAGCTTTATTTATCTCTCT
534291
534292
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CACTCCGCGGAGGTTTAGAAACGGGCGCTA
534357
534358
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGGCGGGGATAGAAATGCGACTTATGCATA
534423
534424
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTTGTTGATGTTATCCCTGTTAGTAGAATA
534489
534490
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCAAGAAGCGACAACACTTGCAGCACATAT
534555
534556
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATCTAAGAAAAGACATCATTGCTTATTCG
534621
534622
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TGTCAATTTGTGGTAGTTCGAACAGCGCCA
534687
534688
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GCAGATGGGAATCGAACAACAACGCCCGCCG
534754
534755
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATCTGCTATTTTTGGGTCTCTCGGAGAAGA
534820
534821
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ACTTTATCTAATCTTAAAATTTGATGATTA
534886
534887
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTTTACGCAATGGTCTAGATACAGGTGCAG
534952
534953
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATTGTCACGAGTGAACTTTGTAATGGCTTT
535018
535019
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTATACGATAGCATGGACGGTAATTTAGTA
535084
535085
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCTTTTAACTTTGCGTATACTGCAACAGCG
535150
535151
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCTTTTAACTTTGCGTATACTGCAACAGCG
535216
535217
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCTTTTAACTTTGCGTATACTGCAACAGCG
535282
535283
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCTGGAAATATGACAACGTGGGTGCTGTAA
535348
535349
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TATACGCTGTTTTAGAGTCCCAGTCAGGCG
535414
535415
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CAATGTGAAGCGACTGAAACAGTCACTACA
535480
535481
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATCAGTAACGTTGCACAAGCTACGTCATAC
535546
535547
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TGAAACAATGTAATATATATTGAGTAACAA
535612
535613
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TTCGCAGTCAATACTTGGCAAACAAATGGG
535678
535679
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GAATATCCAACATTTTCATACATGATAGA
535743
535744
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ACGTCGTAGTGACGATGACTATTTAATACA
535809
535810
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GACTCCGCTGCTTTTATGGTTGATACAAA
535874
535875
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTAAGACGGTTCTAAAAGGACAAGAAGCAG
535940
535941
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GTATTTCTTCGCCAAGTTGCGACACTCTAT
536006
536007
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATATCCGTGCGCTTAAAGCATTGTGTGCGT
536072
536073
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GCGGTCGAACCAGAACATTCGACTACCGCA
536138
536139
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATATTTGTTTTTGATTGTATCGCTATCTAAG
536206
536207
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GCATTGTATTGCGTTTATATCAAACATCAA
536272
536273
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATTTAAGAAGTTGATACGAGCGTACGAT
536337
536338
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCTTTTCTGGAACATATGCTGGTAAAACTA
536403
536404
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGGGACTAGCGATAGTGAGCAAGCGAAGGA
536469
536470
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AAATACAACGCGCAAAGCGTACGGACTAGA
536535
536536
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GCTCACTTGTCAATTTAGTTGATTGACTGT
536601
536602
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AAAAAGAATTGATGGAAAAGGAAGTTAATG
536667
536668
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATGAAGAATAACGCTGCTATCATCGCAA
536732
536733
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGCTATCCAGCTGCCGAACGGAAAGGACTA
536798
536799
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGCAAAAACAGCGTTGGTTGGTTGTAAAAT
536864
536865
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TTTATAGATGAAAACGGAACGTTTAGACAT
536930
536931
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGAACTTCAAGCTTTGCTTGACAACGCAA
536995
536996
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATATAAAGGATATTGGTGGGTTTGTAGGTG
537061
537062
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATGTCAATAAAAGTCTGTCCCTTCCCTTT
537127
537128
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ACCAGCTTTTATTTTAGAACCCTGCCCAT
537192
537193
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATCTAATGACTGGAACAAGAAGCTTGAAC
537258
537259
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATATGCAAGTTTTCAACCGCTTCATCCTT
537324
537325
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTGTATAAACAAGAGCTTGTAACAGTCGAG
537390
537391
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTTGCATTTCTTGCTACCTTTCCGCGAATTA
537457
537458
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATAGATATTATGAAAGTTTTTTCAAGTGA
537523
537524
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TAACAGCTATCAATTTGTAACGGCAAACAA
537589
537590
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TAGAAAAAGGGAAGGATTTTGCGGATGGATA
537656
537657
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCCAAACAGGATACGTCAGATGAAGAAGAGC
537723
537724
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CCGTGCTTTACGGTGAAGGTGTCTCAAAAG
537789
537790
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTAATATGGTGTGCTTGAGGAAAGTGGCTA
537855
537856
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GCGCTTACAGTATTGCAAAAAGATTTTAGA
537921
537922
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GAAACAAAGCAAGCTAAGAGCATTTGTAAA
537987
537988
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ACGTTGAAAGACAAAGTATCCTCAGCCAT
538052
538053
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTCCGCTTTGGAGAGCCGTAACAAATGCTT
538118
538119
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTTTGACAATAGAAAAAAGCTTCTTAGCTG
538184
538185
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATTAGCTATGAAGCATACAAAGGAGAGGGT
538250
538251
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TGGAGGAAGCTTTGATATTGACCCACGCGA
538316
538317
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AACGCTTGCCCCATAGTTATTAGGGAATCT
538382
538383
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GAAGACGCAGGGATTAGCACAGTGATGCAT
538448
538449
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATCTCCGTCTGCAACCACATAGCGGACGTT
538514
538515
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CATTTCTTCGTTGTCGCTAGCGTCTTCACC
538580
538581
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATTCCGTGAAATTAATATTTTTTGATTCG
538646
538647
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TACGTTTGTAATCCACTTAGACAAGCGCAA
538712
538713
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTTTAGCAGTTGTGAGCGGAAGCCCAGACT
538778
538779
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TATACGTCTAATAATATAGTTTTTGGCCGT
538844
538845
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGCACTTAGTTCTAAAGTTTACACCATCGA
538910
538911
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AAATAACGTTTTTCCCGTCATTTGTGTAC
538975
538976
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TTGACAGCAAGTGTAAAAGTCGCAACTGCT
539041
539042
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCTCCGAATTACAAAACGGGCGATGAGAT
539106
539107
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AATTAATTAACTTACTCTCATCTTCTACAA
539172
539173
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TGATTATGAAGAGAGCGAAGCAGATGGGGG
539238
539239
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AAAATTATGTCGAGAAATACATGTTACGACC
539305
539306
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CTAAAGTAACTAACACCACATCGGAAGCAG
539371
539372
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGACAACCCTTGAACTAAATGACTTCACAG
539437
539438
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TCATAGATGTTCTTGCTACGGTCTCTTGTT
539503
539504
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGTTATTTTGTCTACACCGGACGGTACAGT
539569
539570
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GTTAGGGTATACTGTGCAAGTATTTTTATT
539635
539636
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATTGTTTGTCAACAAGATTACTTCCATATT
539701
539702
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AAAATTGATACAAGACCGGACTTATGGTT
539766
539767
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TTCGTTTTCACGACTTACGGCACACTTCTG
539832
539833
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TAGGTGTGCCTTTCTCGTTGTAGCCTACAG
539898
539899
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TAGAAATAACAGATGTGATCGCAACAGCGT
539964
539965
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATTTATTGTTTTTGTGGAAACTATTAGCAA
540030
540031
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GACAAAAGCTAATATGTTGTATCCAGACG
540095
540096
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
CGGCTCGCCTTTTATTAATCGTAGTTCCTG
540161
540162
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
AGGTGGTTCAATTAGTGAAGAGTAACCAGC
540227
540228
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
GAAATATCAGCAATCAAGTGGAACAAAGAG
540293
540294
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
TTATATGATTGATGCGTTGATACCACCTAT
540359
540360
ATTTTGGTACTCTCTCAAGTTTTGGTATTAGGAAAT
ATTTTATCTGGGAGAAAATAAACAATGACG
540425
540426
ATTTTGGTACTCTCTCAAACATTGACATTAGAAAAA
540461
Left flanking sequence : Till position 534160 (length
bp)
TATAATGAATGGCGAATTATCGTTGACTACAAAGGAATTCCCGCAAATATTATTGTTTACCTTGATAGGT
TGATTTAGGTTGAGGTATAATGGAAAAGAC
Right flanking sequence : From position 540461 (length
bp)
TTCGGTAGAATCACCGCGAACCAATTCGGTTAAACAAATGTGAATGGAGCTAATTGATTTTGGAATCATA
GAAAAGTTGTAGCGGATAACAAAAAAGATA
Print the CRISPR sequence : From position
bp To position
bp