Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009687_1                                                                                                                 top


Strain : Clostridium aceticum GCF_001042715 RefSeq :NZ_CP009687 (chromosome circular)
CRISPR id : NZ_CP009687_1
DR consensus (30 bp) : ATTTAGAAAATACCTATAAGGGATTGAAACNumber of repetitions :14
Begin Position : 1146356 End Position : 1147243

1146356ATTTAGAAAATACCTATAAGGGATTGAAACTTTATGTAACGTGTTTTCATTACTATAGATGTTGAG1146421
1146422ATTTAGAAAATACCTATAAGGGATTGAAACAGTAGTTTATTACCTAGTTCAGCAGCTCTTTCTCCTG1146488
1146489ATTTAGAAAATACCTATAAGGGATTGAAACTCTTGAAAAGGATTATTTTAAAAAGGAATTTTAAAAA1146555
1146556ATTTAGAAAATACCTATAAGGGATTGAAACACTCAATTGTTCTTTCTGCTCTATCTCTTTCTTCC1146620
1146621ATTTAGAAAATACCTATAAGGGATTGAAACTCCATTGCCCACTTTCTAGCGTTCACCGCCCACTG1146685
1146686ATTTAGAAAATACCTATAAGGGATTGAAACGCCGCATCGGTCATTTACTTTCTATTTCTACATAC1146750
1146751ATTTAGAAAATACCTATAAGGGATTGAAACACGAATTGTCCTAAGATAACAGGCTCACCTTTAACG1146816
1146817ATTTAGAAAATACCCATAAGGGATTGAAACATTTTAGTTCATATGCTACTCCCGCAGAAAGTTATTG1146883
1146884ATTTAGAAAATACCTATAAGGGATTGAAACCATCAAAAATCCTTTTCTTAAAGCCATTTTTATTG1146948
1146949ATTTAGAAAATACCTATAAGGGATTGAAACTTATTCTGTCAATTGGAATATCTTCTTTCTTTTTCTG1147015
1147016ATTTAGAAAATACCTATAAGGGATTGAAACACCACTCAAATAAATACTCATCGGATTTTGCATAGAC1147082
1147083ATTTAGAAAATACCTATAAGGGGTTGAAACTGTTCTATATGTTCTAGTGGACTTGAGTTGCTTA1147146
1147147ATTTAGAAAATATCTATAAGGGATTGAAACTGCTTTTAATCCTGCCAATGTTAGTCATCCTACTATT1147213
1147214ATTTAGAAAATACCTATAAGGAATTGAATA1147243
Left flanking sequence : Till position 1146356 (length bp)
ATAGGTTAGGATCAAACACCTATAAAAAATAAGAAGTTGAGTAATTAAGTTAAATTTTGACAATTTTTAG
CAAACATGATAAAATCAATATGTTTAATGG
Right flanking sequence : From position 1147243 (length bp)
GAACATCAAAAAGTAATATGATACAATAGAAAAGTGCAAGATATAGTTGATATAATTATTATAACAAGAC
GCTTCAAGAGGTGAAGGCAAATGAATGAAA
Print the CRISPR sequence : From position bp To position bp