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CRISPRs details
NZ_CP009961_2
Flanking alignement tool
Page manual
  
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NZ_CP009961_2                                                                                                                 
top
Strain :
Thermofilum sp. 1807-2 GCF_000993805
RefSeq :
NZ_CP009961 (chromosome circular)
CRISPR id :
NZ_CP009961_2
DR consensus (25 bp) :
GTATCAGAAAAGAATGAATTGAAAG
Number of repetitions :
72
Begin Position :
569862
End Position :
574383
569862
GTATCAGAAAAGAATGAATTGAAAG
GAGGAATAACTCATGCAGTGCAACCTGCACCGGTGA
569922
569923
GTATCAGAAAAGAATGAATTGAAAG
TCCGCGAGCGTTCCCGTTGAGTCGGGGGGTGACAGA
569983
569984
GTATCAGAAAAGAATGAATTGAAAG
TTACACCGCGATAAGTAAGACAACAGACTTTAGCACGT
570046
570047
GTATCAGAAAAGAATGAATTGAAAG
TTGACTACGCTCGCTTTATCGTATTCAGTCCACATG
570107
570108
GTATCAGAAAAGAATGAATTGAAAG
CATTACCCGCTCTATACGCCTTTGGTGCTAGGTATATGGCTT
570174
570175
GTATCAGAAAAGAATGAATTGAAAG
AAGCGATGAGAGGTTGCCCGCGCTACGGTAGCCCGCCT
570237
570238
GTATCAGAAAAGAATGAATTGAAAG
TCACTCTCGATGAGTTTGCAGAGACGGCAAAGTACCAC
570300
570301
GTATCAGAAAAGAATGAATTGAAAG
TTCCGGTCTCCAATGTACTCGGGCCGTATGGTTCTTCAC
570364
570365
GTATCAGAAAAGAATGAATTGAAAG
TCCTATACATCATCTACATGGTATCGGGAAGACTAATCA
570428
570429
GTATCAGAAAAGAATGAATTGAAAG
TCAATGGGAATAGTCTGAGGCTGTGAAGCGGGCTCCTCG
570492
570493
GTATCAGAAAAGAATGAATTGAAAG
TCAATTTCGCCTCAACCACCATAAACATGTCGT
570550
570551
GTATCAGAAAAGAATGAATTGAAAG
ACGAGTAACAGTCTTGTACGACAGGACGCCCGGGAGCCCG
570615
570616
GTATCAGAAAAGAATGAATTGAAAG
CTTCTTTTCGCCACGGGTACTCCCCCCTTTTAATACGT
570678
570679
GTATCAGAAAAGAATGAATTGAAAG
CTCCCTGCTTGAGCCGGAACTGCTCGGGCAAGCCCTCGG
570742
570743
GTATCAGAAAAGAATGAATTGAAAG
TACTCTCCAAGGAGATACCTGAGGCATTAGAGCTGATAC
570806
570807
GTATCAGAAAAGAATGAATTGAAAG
CATATCAATTCAAATATCAATGACTGTAGGTCAAGTCT
570869
570870
GTATCAGAAAAGAATGAATTGAAAG
TCGAGCCTGATTGGTTGTTTTGGGTGTATATCACAGCTG
570933
570934
GTATCAGAAAAGAATGAATTGAAAG
TAATCCTCTTTTCTAATTCTCAATCCTTTATACTCGGGT
570997
570998
GTATCAGAAAAGAATGAATTGAAAG
TTATTTTTTCCTATTGGAGAACACATATAGCTATAGCATAT
571063
571064
GTATCAGAAAAGAATGAATTGAAAG
TGTATAAGTTGTTCTTGCGTCTCATCTGTGGTTCTCAAT
571127
571128
GTATCAGAAAAGAATGAATTGAAAG
CTTTCCTTGAAAAACCTGACGAGTTCAGGAAGCGGGT
571189
571190
GTATCAGAAAAGAATGAATTGAAAG
TATCGTGTTGCAAGATGAGTAATATTCCGCTACTCGT
571251
571252
GTATCAGAAAAGAATGAATTGAAAG
TGGCGAAAAAGCCATGGCAAGAAAAAAGCAAAAGGAAAA
571315
571316
GTATCAGAAAAGAATGAATTGAAAG
TTTTCACCAAACCTAAAACCGTCAAAGGGGCTTATAA
571377
571378
GTATCAGAAAAGAATGAATTGAAAG
AACGATGGTACGAACTGGGATTACACTGGTGCTAGTGCTA
571442
571443
GTATCAGAAAAGAATGAATTGAAAG
CTGCTATTTTCTCATGTTGTTCTTTTTCTAACATCTCTT
571506
571507
GTATCAGAAAAGAATGAATTGAAAG
AGAAAGATCACGGGGCGCACCGTTGCGCTCCGCTGCCAC
571570
571571
GTATCAGAAAAGAATGAATTGAAAG
AAAATTTTCCATCCATAGTATGTTGCGTCCTCGCTTTTT
571634
571635
GTATCAGAAAAGAATGAATTGAAAG
GGTATTGTAGCTTCGCTGCTATGGATTCAATCGCGACGC
571698
571699
GTATCAGAAAAGAATGAATTGAAAG
TTATTTTATCTAGAGCGGAAAACTATACCTCTATACCCC
571762
571763
GTATCAGAAAAGAATGAATTGAAAG
ACACTGGGAGAACTACCTTGAGCGTGCCCTGAGT
571821
571822
GTATCAGAAAAGAATGAATTGAAAG
TAAAGATAATTATGTAATTTTCACCGTCATAATCAAAACT
571886
571887
GTATCAGAAAAGAATGAATTGAAAG
AGAGCAATGTGCGCCGCCTCATGAGCGAGAACTCCGA
571948
571949
GTATCAGAAAAGAATGAATTGAAAG
CGGAATTATAGACTTCAATTGCTACTATTGCAAATT
572009
572010
GTATCAGAAAAGAATGAATTGAAAG
CACTTTGTGACAGTCCTGTAGTCTTTTCACCCGTTATTAA
572074
572075
GTATCAGAAAAGAATGAATTGAAAG
CGGATATAGCATGGAGCCCCTACATGACCCGCAGGCCCCT
572139
572140
GTATCAGAAAAGAATGAATTGAAAG
ATAATTTGCCCTTTTTACTAGTTTTATTTCCGTCATGG
572202
572203
GTATCAGAAAAGAATGAATTGAAAG
ACGGGAACGCTTGACAGGTCCTCCTCCCTGGTCCTCCA
572265
572266
GTATCAGAAAAGAATGAATTGAAAG
TTTGTTGTCATGCTTGTTCATGATATTGTATGCAAAATGG
572330
572331
GTATCAGAAAAGAATGAATTGAAAG
AGGTCTCCGGCAAGTGCGACTGGGAGGAAGGCCTTCACG
572394
572395
GTATCAGAAAAGAATGAATTGAAAG
TGATCCACGTGAGAGTATCGCACCCGACGCCGTAGTT
572456
572457
GTATCAGAAAAGAATGAATTGAAAG
CAGCGTGAGAGGTAAACGTCATTGTACTCGTCGA
572515
572516
GTATCAGAAAAGAATGAATTGAAAG
TTAATGCCATGCACTTTAGCCAAATGCCTTGTTAGGACT
572579
572580
GTATCAGAAAAGAATGAATTGAAAG
AGGGGTCGCAGATACATTTTAAGTTACGGAGTTTTTTAC
572643
572644
GTATCAGAAAAGAATGAATTGAAAG
TCGTACTTCGGCGTATACATGGCCCTGTTCGCGGGTAT
572706
572707
GTATCAGAAAAGAATGAATTGAAAG
ACGCCCTTAAAAACCCGTTAAAAAATCTTCAACCCCCTAT
572771
572772
GTATCAGAAAAGAATGAATTGAAAG
AGAGCGACGGCACGGTACAACCCCTGGAGTCAATAC
572832
572833
GTATCAGAAAAGAATGAATTGAAAG
AGATTTTGCTAGCTATATAGTTTTTTCCCTTAGCTATAT
572896
572897
GTATCAGAAAAGAATGAATTGAAAG
CGAACAAGCCGGCCACGAGCAGGAAGACGTCTATGG
572957
572958
GTATCAGAAAAGAATGAATTGAAAG
CGTTGACGTGGATATTGACGCTGACTTGATTAAGTCAC
573020
573021
GTATCAGAAAAGAATGAATTGAAAG
TTCATCCGTTGTGTACGCTGTATATCTCCAGTATCCAA
573083
573084
GTATCAGAAAAGAATGAATTGAAAG
AGAAATCCCTTGGAGAGGCCTACCCGCACGTCAAAATC
573146
573147
GTATCAGAAAAGAATGAATTGAAAG
ACATTCGCAATAACGTATTCATAGTCGAGGCTGGGACGG
573210
573211
GTATCAGAAAAGAATGAATTGAAAG
AATAGCCACCGAGTGCTGGGCTAGGCGTGGCAGGTTCAA
573274
573275
GTATCAGAAAAGAATGAATTGAAAG
CACAGAGGAGGCTTTGATAATACAAAACCGTAATACTTT
573338
573339
GTATCAGAAAAGAATGAATTGAAAG
CTAATGAGAAACATATGTTATTAGCTATAGCATATTAG
573401
573402
GTATCAGAAAAGAATGAATTGAAAG
ATAGTAATCTCTCATTCACTTCATGACAAACACGTTTTTG
573466
573467
GTATCAGAAAAGAATGAATTGAAAG
GCACCTTCTCGTTTAACAGTTCGACGATTGTCTTACGCGC
573531
573532
GTATCAGAAAAGAATGAATTGAAAG
TTCCTCCCAGTGGTGATGCCCACTGGCTAGCCGTCGTGAA
573596
573597
GTATCAGAAAAGAATGAATTGAAAG
TCCGGCTCCGGTTCCGCCTCCGGAGCCAGGGAAAGGAGCT
573661
573662
GTATCAGAAAAGAATGAATTGAAAG
CGATAACGTATTCATATACTGCTTCTTCTACACTATCAG
573725
573726
GTATCAGAAAAGAATGAATTGAAAG
CGTTCTTCCCAGCTGTAGGGTGGTTCCGGCTCCCATAATT
573790
573791
GTATCAGAAAAGAATGAATTGAAAG
CGAATAACTCGAAGGCATCCTTGTACTCGTACTTCTTGT
573854
573855
GTATCAGAAAAGAATGAATTGAAAG
ATGGTCCGAATTCTAGCTGTGGTATTCCATTTTCGTTTT
573918
573919
GTATCAGAAAAGAATGAATTGAAAG
ACGTGCGAGCACGCGTGCCACGTAGTCGGTTGACGGCG
573981
573982
GTATCAGAAAAGAATGAATTGAAAG
CAGTTCCTCCTCTTCTTCTCCCTCAATTTTGTTACGAAT
574045
574046
GTATCAGAAAAGAATGAATTGAAAG
AGGTAAAAATCGAGAAGAGGGAGGTGAAGAAGT
574103
574104
GTATCAGAAAAGAATGAATTGAAAG
TTCACTATGAACTGGTGGGGCGGCCTCGGACGTTGTAGG
574167
574168
GTATCAGAAAAGAATGAATTGAAAG
GTAGCTCTCAGAAATTAAAACAAAGATATCGCGTGGCAGGAAT
574235
574236
GTATCAGAAAAGAATGAATTGAAAG
AGGACTATGTGTTCTTGTTCAGACGTTTTTGCTTGCAT
574298
574299
GTATCAGAAAAGAATGAATTGAAAG
GCTCGAGCTGTCTTCTAGCCCATAGGAGGAAGTAG
574358
574359
GTATCAGAGAAGAATGAATTGAAAG
574383
Left flanking sequence : Till position 569862 (length
bp)
GTGTTATTTCCTGTAAATTCCCACCAAAACCGGATAAAATACAACCATTAAATAGGAAAAAATTAATATT
TATCCCCAACCACAAATAGAACTGGAAGCG
Right flanking sequence : From position 574383 (length
bp)
TTAGCTAGATCAGCTTTGATGTATACTCCTTTATGCTTTGTATTAGAAAAAATGGCTTGAAAGCGATGTC
TACGTGGTGAAGGGGCGGGGGGTACGTCTT
Print the CRISPR sequence : From position
bp To position
bp