Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010280_2                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Newport str. CVM 22462 GCF_000272895 RefSeq :NZ_CP010280 (chromosome circular)
CRISPR id : NZ_CP010280_2
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :20
Begin Position : 2433913 End Position : 2435099

2433913ACGGCTATCCTTGTTGGCGCGGGGAACACACGGCAACGGATGCGACCGCCAGCGCGATCC2433972
2433973CCGGTTTATCCCCGCTGCGCGGGGAACACTTGATGAAAGTTCATCTAATAATGATTGTGCT2434033
2434034GGGTTTATCCCCGCTGGCGCAGGGAACACGAACCGCTTTTATTTTTAGACATAGAGCACCG2434094
2434095CGGTTTATCCCCGCTGGCGCGGGGAACACGCCACCCGGACAACAAAATGAATCCCGATGAT2434155
2434156CGGTTTATCCCCGCTGGCGCGGGGAACACTTCAAACTGCTTGCGGTAAGAAACTGTTGCAC2434216
2434217CGGTTTATCCCCGCTGGCGCGGGGAACACTGCACTCCCGACCGTTGAGGTGACAAAACCCT2434277
2434278CGGTTTATCCCCGCTGGCGCGGGGAACACAACCCTTACGGTTATATGAAAGAAGATTTTTA2434338
2434339CGGTTTATCCCCGCTGGCGCGGGGAACACCGGCATATCAGGAGTTGGAGCAACCAGCGAGA2434399
2434400CGGTTTATCCCCGCTGGCGCGGGGAACACTGACCTGAAGAAATAACATTGACTCCAAACTG2434460
2434461CGGTTTATCCCCGCTGGCGCGGGGAACACGTTTTCTCTACATTTAGCTATAGACGTTAGTT2434521
2434522CGGTTTATCCCCGCTGGCGCGGGGAACACTGGCCTGACTTTATCAAGCAGTGCATACTGAC2434582
2434583CGGTTTATCCCCGCTGGCGCGGGGAACACAAACTCTGGGCGCTCGAATGGCTGTCCTATTG2434643
2434644CGGTTTATCCCCGCTGGCGCGGGGAACACTGGCGGTGTAAATTTTTACGTTTTTCATATCT2434704
2434705CGGTTTATCCCCGCTGGCGCGGGGAACACGAGACTTTTCACACTGATAATGTTGTTATTTT2434765
2434766CGGTTTATCCCCGCTGGCGCGGGGAACACGTTGTCGCGGTAGTATTTAGTCGAAAGCATGA2434826
2434827CGGTTTATCCCCGCTGGCGCTGGGAACACACGGCCTGATTTAGAGTTAAACATGGTCACGC2434887
2434888CGGTTTATCCCCGCTGGCGCGGGGAACACTACGGGTTGTACCATGCCACTGGCGTTTTGTG2434948
2434949CGGTTTATCCCCGCTGGCGCGGGGAACACATGGCGTGTCTCGATTGCGCGCTGCCGCACTG2435009
2435010CGGTTTATCCCCGCTGGCGCGGGGAACACTTCCCATTTAGCGAGTTCTTTTGCCGCCAGCA2435070
2435071CGGTTTATCCCCGCTGGCGCGGGGAACAC2435099
Left flanking sequence : Till position 2433913 (length bp)
CATGGCCTTCTCCTGTATAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 2435099 (length bp)
ACTAAACGGATATCATTGTTTATAAACTACTTTTTATCAGCATTACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position bp To position bp