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CRISPRs details
NZ_CP010529_3
Flanking alignement tool
Page manual
  
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NZ_CP010529_3                                                                                                                 
top
Strain :
Haloarcula sp. CBA1115 GCF_000827835
RefSeq :
NZ_CP010529 (chromosome circular)
CRISPR id :
NZ_CP010529_3
DR consensus (37 bp) :
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
Number of repetitions :
37
Begin Position :
2853939
End Position :
2856578
2853939
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
GGGTTCCACGTCACGTCAGTCCAGGCGATGTCTGAT
2854011
2854012
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
TCGCCCGTAACGGTATAGAGCTTCTCTGTACTGAGCG
2854085
2854086
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CGGTCTTGATGGCGCGACGGTGGGATTCGCGCGTGC
2854158
2854159
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
TCCGTAGTCGGCTGGGCTGCAACGACGTTCCAGAC
2854230
2854231
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
TATCCGAACCCCATGCCCGATCTCGAGCAGCAGGA
2854302
2854303
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
ATCACGACGTTGATTACCATAACGATAGCCAGCGCG
2854375
2854376
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CCGTCCTCGAAGCCGTCAAAAACGACAGTCTG
2854444
2854445
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
TGTTGTTCATGTGACTCTCTCCGCCGTCTCACGG
2854515
2854516
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CGCAACTTCGCGAGCGACGTTCTCGAACCCGGCGCGG
2854589
2854590
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
ATCGTTCGCGGCGCGGAGGACTCCAACGGCAACCG
2854661
2854662
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CGACCAAATCATCTCCCGTCACCCTCCGGTTCGG
2854732
2854733
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
GCGTCTTCGCGAGTGTCAAGCCGCGCGACGGTGTT
2854804
2854805
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
TTATCATAGTGCGCTGGCTCATCGCAATAGAT
2854873
2854874
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
ATGGCGAGTAACACCGACCGTACCGGCGGCGCAATCGA
2854948
2854949
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CGTTCTCCGACGCGATCAACCAGGTCGAGCAGGT
2855019
2855020
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
GTCCTGTTGGCCGACCACAAAGGGTATGAGTTTG
2855090
2855091
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
AGCAGGCGTGAGCCTATCAGACTACGGAGCGCGGTC
2855163
2855164
CGTCGCGACGGGCAGAAACCCAATGCGGGATTGAAAC
TCGTTGGAGCGAGCGGATACGCGCCATATGTCCCG
2855235
2855236
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
ATGGCGATGAGTGAGAACGAACTTGAGGAGGTGC
2855306
2855307
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CGTCGGTATCGAACTCGGTGCCACACTCGTCGCAGCG
2855380
2855381
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
ACACGCGTGATGGGGCCGCCACGCTGGTCGTCGCTAT
2855454
2855455
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
TGCTAGCCGTCACAGTGTTCTCGGCGGCGCTCGTG
2855526
2855527
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CGGTTTTGCGAACAACTCGCCAACCGCCGCGATGAC
2855599
2855600
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
AGGCCCGGGGCGGTTCTCCTGCGGCCACGTCTCAA
2855671
2855672
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
AGGATGTCCTGCTTGCCCCGTGGGCCAAAGAAG
2855741
2855742
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
ATTATCTTCAAGATAGCTACCACCGAGGTAGCCAACA
2855815
2855816
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
GGGCCGTCCGACTCGCGGAGCTTTTCGAGCAG
2855884
2855885
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
GCTAAGTGGCTGTATCACCGAAACTGGGTAACAGTC
2855957
2855958
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CATATACGGCGGTTTAAGCCGCCGTCCGTTGCTCT
2856029
2856030
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
GCGTCGTATCGCGACGCTGGCGTTCGGTAGCTATGTG
2856103
2856104
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
GCGTCGTATCGCGACGCTGGCGTTCGGTAGCTATGTG
2856177
2856178
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
AGACTCCGTTAGATGCGGTTTGTAGCCGCCAGAGC
2856249
2856250
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
CATCTCCGCGAGTGGGAAATCGAACTCGTCGAAC
2856320
2856321
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
ATCACCCTCGGGTCGGAGGGAAACGACTGTGCGGCCG
2856394
2856395
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
TCTCTGGCCTCACTGTGTCGGATAACGCAGGGGCCTC
2856468
2856469
GTCGCGACGGGGCAGAAACCCAATGCGGGATTGAAAC
AGCATGGCAATGATGGCGCTGGTCGTTCGCTCCGCT
2856541
2856542
GTCGCGACGGGGCAGAAACCCAAACCGGAATTGCGAC
2856578
Left flanking sequence : Till position 2853939 (length
bp)
CCTTTTTTAATTCTGTGTACAGCAGGGGTCCACGAAGAACAGTTCTTGAATGACTCACCAAGCGCAATCT
ATAGGGCCTATGAAAGATATATTACCCCCT
Right flanking sequence : From position 2856578 (length
bp)
TTATTAAACAAGTCGTAACAGATAGTCCGATTTCCACTCGAAACACGCTGTGTCTACGCACTGATCACGC
CGTCCGCAACCACTATCCTAACGGAAACTG
Print the CRISPR sequence : From position
bp To position
bp