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CRISPRs details
NZ_CP010888_6
Flanking alignement tool
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NZ_CP010888_6                                                                                                                 
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Strain :
Clostridioides difficile GCF_001577795
RefSeq :
NZ_CP010888 (chromosome circular)
CRISPR id :
NZ_CP010888_6
DR consensus (30 bp) :
GTTGAAGAATAACATGAGATGTTTTTAAAT
Number of repetitions :
9
Begin Position :
1665537
End Position :
1666097
1665537
GTTGAAGAATAACATGAGATGTTTTTAAAT
AGTATTAGAAATACTTCGCTTGTTTGGAAATCATAA
1665602
1665603
GTTGAAGAATAACATGAGATGTTTTTAAAT
TCATCTAAAAGTTTAGCCCAAGTTTGAACTGCTATC
1665668
1665669
GTTGAAGAATAACATGAGATGTTTTTAAAT
CTATCTCTTCTTTTACCTTCTATAAAATTTAATTGT
1665734
1665735
GTTGAAGAATAACATGAGATGTTTTTAAAT
CTATTAGTTACTTTATAGCTTACATAGTAAATGCCT
1665800
1665801
GTTGAAGAATAACATGAGATGTTTTTAAAT
ACTGTTTCTCTGTTCGAAGTATGTGCTACATCTCCAA
1665867
1665868
GTTGAAGAATAACATGAGATGTTTTTAAAT
GAAAGCCACGCTTGCGCATTAGACTGTTTGAAGTTG
1665933
1665934
GTTGAAGAATAACATGAGATGTTTTTAAAT
TGAATAAATTCTTTTGTATTTTTATCAAAATACGGCTC
1666001
1666002
GTTGAAGAATAACATGAGATGTTTTTAAAT
ATGTGTTGAAGCAGAAGCTTTTGAGAATGGTTTAGA
1666067
1666068
GTTGAAGAATAACATGGGATGTAAAAATAA
1666097
Left flanking sequence : Till position 1665537 (length
bp)
ACATCTGAAATTTAAAAACACTTGGGATAAATTTGATTAATGTTAGTATTTACAATGGTTATGTTGTTTT
ATTTTATTTAAGAATGTGCATTTTTAAGTG
Right flanking sequence : From position 1666097 (length
bp)
ATATTTATATAAAACACTTACTTAAATAGTAGGTGTTTTTTAATTGAAAGGATGTGATTATAATGTAAAA
ATTTTGAAGATATAGTATAATATTCTTATA
Print the CRISPR sequence : From position
bp To position
bp