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CRISPRs details
NZ_CP011099_1
Flanking alignement tool
Page manual
  
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NZ_CP011099_1                                                                                                                 
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Strain :
Mannheimia haemolytica GCF_000963675
RefSeq :
NZ_CP011099 (chromosome circular)
CRISPR id :
NZ_CP011099_1
DR consensus (32 bp) :
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
Number of repetitions :
18
Begin Position :
1041692
End Position :
1042861
1041692
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CCTATAACGAGCAATGGCATTTTGATCTACGGTAAA
1041759
1041760
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TTCTTGAATACCTCCGGAGTCAGTTAAGATAAGG
1041825
1041826
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CTTTTTCAAGAATCAAGATTAAGAGATCCAAACAA
1041892
1041893
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TCCGACACTTGCCCGTCTGCACTCGCCCTAGTGC
1041958
1041959
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CACCGCTGCTACTTCGGTTATCGGAGTAGTTTGCAC
1042026
1042027
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
GTGGCACAGTAACACGAGCAGATGCTGATAAACGC
1042093
1042094
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
CAGCAGCCGTTGTTACCGTGGTGCAATGCTTGCG
1042159
1042160
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TACACTTATTGCCATAGGGTAGTAGTAATCTTTTAC
1042227
1042228
CCAGCCACCTACGCGTGGCTGCGAATTGAAAC
TGCGATTTTTGGATTTTTCGGGCGATAAATGATA
1042293
1042294
CCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TCGTGGCTGGTTATACAAAGAAAAGCATTGTTGG
1042359
1042360
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TTAAATCTAAAGCTAAAGCTATTTTATTAATTAAA
1042426
1042427
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TTTACCGTTTACCGATTGGATTTTAATGCTAGAG
1042492
1042493
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
CCTAAATTGCCGTAAAAATCTGCCATTAGCTACGC
1042559
1042560
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
CTCATAACGAATCCAATCCTGTTCGGTTAATCCCC
1042626
1042627
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
AGGGGCGTGTACCGCAATCAATTTTAATTATAACCAA
1042695
1042696
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
TTTATCTGTTGCGGTCAATTGTATATCTTGAATTT
1042762
1042763
GCAGCCACCTACGCGTGGCTGTGAATTGAAAC
CTCGTCTTGAATTGGAAAATCAAGGGCGACAATAG
1042829
1042830
GCAGCCACCTTCGCGTGGCTGTGTATTGAAAC
1042861
Left flanking sequence : Till position 1041692 (length
bp)
CAATATATTGGCGATATGCTATACTTTATCCACTCTCTACAAAACGTTAGCGAATAAAGGGCTAAAAAGC
CTGATATTTCAATACGTTATCTTATAGGGA
Right flanking sequence : From position 1042861 (length
bp)
GGTGTACCCACAAATCCTATGTTTTCGCCATTGGCTGCTACCTTCGCATCAATATATATTGAAATATCAA
TGGCAAATTTGTATGTTGTTAATTAGACTG
Print the CRISPR sequence : From position
bp To position
bp