Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011131_11                                                                                                                 top


Strain : Lysobacter gummosus GCF_001442805 RefSeq :NZ_CP011131 (chromosome circular)
CRISPR id : NZ_CP011131_11
DR consensus (28 bp) : CGTCATTCCCGCTAACGCGGGAATCCAGNumber of repetitions :4
Begin Position : 3079046 End Position : 3079262

3079046CATCATTCCCGCGAAGGCGGGCTCCGCTCTACTTTGGCGGAGCCGAAAATCCAGAGACTTCAGCGCGATCCATCCAGGC3079124
3079125CGTCATTCCCGCTAACGCGGGAATCCAGAGCCTTCAGCGCCATCTCTCCAGAT3079177
3079178CGTCATTCCCGCGAACGCGGGAATCCAGCGACTTCAGGCGTTCTCGCACGAAAGGCA3079234
3079235CTGGATTCCCGCTTTCGCGGGAATGACG3079262
Left flanking sequence : Till position 3079046 (length bp)
GGAGGGGGCTTGCGCGGTTCTCTTACGGGGCGTGCTGCGAGGAAGAATCCAGGGCTTTACGGAACCGGGC
ATCCGGAGCCTTCAGCGCCATTCCCAAGGC
Right flanking sequence : From position 3079262 (length bp)
ATCTGGTAGGTTCCGCGGGGGTTGACGATCTTGCGGGTTTCGCTGGATTGAAGTCTTGTGAATTCCGCGG
AATTAGGTCTCGAAGATCTCGCGGAATTGA
Print the CRISPR sequence : From position bp To position bp