Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011339_11                                                                                                                 top


Strain : Microcystis panniformis FACHB-1757 GCF_001264245 RefSeq :NZ_CP011339 (chromosome circular)
CRISPR id : NZ_CP011339_11
DR consensus (36 bp) : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACNumber of repetitions :13
Begin Position : 1777512 End Position : 1778456

1777512CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACTTCTGTTTCTGATTCCGCTGCGATAAGAAGACTAAATGATGTGA1777591
1777592CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACCCAGTTACTTAAATCTCGCTGCCGGTCATTGCCTTTACCAC1777668
1777669CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACTAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACTCTTACT1777746
1777747CCTTACCTATTAGGTTAAATAGGATTAGTTGGAAACTTGTCAGGAGCAGTGCCACCAGGTAACTCCTCGTAA1777818
1777819CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACCCAGTTACTTAAATCTCGCTGCCGGTCATTGCCTTTACCAC1777895
1777896CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACTAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACTCTTACT1777973
1777974CCTTACCTATTAGGTTAAATAGGATTAGTTGGAAACTTGTCAGGAGCAGTGCCACCAGGTAACTCCTCGTAA1778045
1778046CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACATAAACTGGAGAATATCTTTTCCCCATTTACCTTTTTT1778119
1778120CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACTAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACTCTTACT1778197
1778198CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACATTTCGTTGTTTGTGGAGCCAGTCCCAACCATTTGA1778269
1778270CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACTCTGGATAATTTTGTTGGCAAAAATCTAGGATTTTTT1778342
1778343CCTTACCTATTATGTCAAAGAGGATTAGTTGGAAACTAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACTCTTACT1778420
1778421CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC1778456
Left flanking sequence : Till position 1777512 (length bp)
TTGGTATCGGGACTTTTATCCCCCCCAGGACCACCTTTTTGGAGATGCGTCGATTTGGGGGTCTGTCTTC
CCCTCTCGATGAGACTTTCCAAGGGGTACT
Right flanking sequence : From position 1778456 (length bp)
TAGAAAAAGGGTTTCTTTATAAACCCTTTTTCTGCCTTTCAATTTTGTCGAAATATCTATAAGTAGGTGG
GTGGAATTAAATATAAAATGAACGTAGGTT
Print the CRISPR sequence : From position bp To position bp