Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011382_18                                                                                                                 top


Strain : Calothrix sp. 336/3 GCF_000734895 RefSeq :NZ_CP011382 (chromosome circular)
CRISPR id : NZ_CP011382_18
DR consensus (37 bp) : CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACNumber of repetitions :12
Begin Position : 6173597 End Position : 6174436

6173597CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACAGGACACCTACAACAACAGCAAAGAACTATTCAACAAA6173671
6173672CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACGAAATCAAGTAAAAATGCAAGAAAAAAGCAGACCGAG6173745
6173746CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACTCCCTAATTACCGCACGCCCCACTAAAGGGACAGAA6173818
6173819CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACATTCCTGGCTATTTTCCTTACGGGTTCCCAG6173886
6173887CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACATTGCCTCAAAGGGGAAATGCATAATAGCGGCTATATAA6173962
6173963CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACCATTAGGAACAATCAATACATTATTAGCTTCAGAAA6174035
6174036CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACAAAACACTTAATTAAGAGCCATAACCCTCTCTCATC6174108
6174109CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACCCATTATGTTCTCAGCACTAGGCATCGCTTTCCCTGA6174182
6174183CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACAGGTTTATTCAGTTTCTATCTACGGAAATGTATC6174253
6174254CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACCAGTCCTTTGGATTTATTTGTTAGGTGAAAATATC6174325
6174326CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACGGGTTTGCTCTTAAATCGCCTTCAAAACTATTACGAA6174399
6174400CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAA6174436
Left flanking sequence : Till position 6173597 (length bp)
GATTATTAATATCAATAAGTGTGGCTGAAAGGAGGTCATTTTTTCGACCTGGCAAAACTGCTTGTAGAAC
TATTGTTCTGTAAGGGTTTCAGGTGCTGGA
Right flanking sequence : From position 6174436 (length bp)
TTTATTTTTCTCTAAAGAAATAAGTACAACTGCTCAAAACTACCGATTTAGTTGACGGGATTAAGTTTGA
TTACAGACAGCGATCGCTATCCTCAAATTA
Print the CRISPR sequence : From position bp To position bp