Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011382_5                                                                                                                 top


Strain : Calothrix sp. 336/3 GCF_000734895 RefSeq :NZ_CP011382 (chromosome circular)
CRISPR id : NZ_CP011382_5
DR consensus (37 bp) : GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGNumber of repetitions :13
Begin Position : 2342816 End Position : 2343722

2342816CTAACAGAAGAAATAACGGGTTTCATTTATTAGAAAGCAGGAATAAGCGAAGATATCAACGGAACAATGTA2342886
2342887GTTTCAATCCCGCGAACGGGTTTCATTAATTTGAAAGCTGGACAATAATATTATTCAGCAAAATCCATGGGC2342958
2342959GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCCAGGCTCCATGGTGTTATCTTGTGGTCTGTAGAAGAT2343033
2343034GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTCGGTGAACTGGCAAGAATGGGCATCAACAGAAT2343104
2343105GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTTAGAAGAATTAAGCCTTGGGTGGGAAGAGATGGGAAATA2343181
2343182GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGGCAACATCTGGTCTGTTACTTGACCCAGCTGAAC2343252
2343253GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCGTATCGCCTACGATAAAACCTATGTCGGACGTGAATT2343327
2343328GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTATTATCCGCAGTTGCGACGGATTTTTTAGCTGA2343398
2343399GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTTTTATAGTCATCTAACCTATAGACAGATAAATTG2343470
2343471GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGATAACCCGTGATGATAGAATCTGCCGCAATGGGG2343541
2343542GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCTGCCCCGTATGATGGGGACACTGATAATGGTTT2343612
2343613GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCATTGTCCGCAATCATGTAGAGATGTAATCCTAAGT2343685
2343686GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG2343722
Left flanking sequence : Till position 2342816 (length bp)
ATTAACAGTAGCGATCGCTGTTCTTGAGAAATTCAGGTTTTTGTTACAATACCCCTAGAGTTTAATATTC
TGCCAGAAAGTTATGCGTTCAATCGAGCAG
Right flanking sequence : From position 2343722 (length bp)
TCCAACAGCCAGAAGGTTGTCACAGAAAGACTCACAGCAGCAAAAATGCCGGGGGAGAATCAAAACTCCA
TTTCAGCTATTGACAAAGAGCGATCGCTCA
Print the CRISPR sequence : From position bp To position bp