Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011398_1                                                                                                                 top


Strain : Listeria monocytogenes GCF_001005925 RefSeq :NZ_CP011398 (chromosome circular)
CRISPR id : NZ_CP011398_1
DR consensus (24 bp) : GATACCAGTTCCGTTACTAATATGNumber of repetitions :4
Begin Position : 513893 End Position : 514150

513893GATACGAGTGCTATAACTAATATATATGGCATGTTTCAATTTTGCTCTGGTCTTGAAGAGTTAGATTTAAGTCATTTT513970
513971GATACCAGTTCCGTTACTAATATGTATTCCATGTTTTCGGGTTGTGGATCACTGGAGATTTTGGATGTAAGCAATTGG514048
514049GATACGAGTTCCGTTACTAATATGAATAGAATGTTTCAAAATTGTACTAGTCTTGAAGAGCTAGATTTAAGTACCTTT514126
514127GATACCAGTTCAATGACTGACATG514150
Left flanking sequence : Till position 513893 (length bp)
TATTAGGGATAATGATTATCCGACAGCACCATCTTTACTCACTACGCAATATATGTTTCAATTATGTCGT
AAACTTAGTGAGCTTGATTTGAGTGGCCTT
Right flanking sequence : From position 514150 (length bp)
GGAATGATGTTTAATGGGTGTACAGCGTTAAAATCTTTATATCTGGATAATTTTACGGATGCAGCAATTA
TGACAGATATGTTTACTGGAACCACCTCCC
Print the CRISPR sequence : From position bp To position bp