Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011492_3                                                                                                                 top


Strain : Streptomyces sp. CNQ-509 GCF_001011035 RefSeq :NZ_CP011492 (chromosome circular)
CRISPR id : NZ_CP011492_3
DR consensus (29 bp) : GGGTCCATCCCCGCGTGCGCGGGGAGCAGNumber of repetitions :8
Begin Position : 947667 End Position : 948122

947667GCGGCCATCCCCGCGTGCGCGGGGAGCAGTCGGCGTTGACCTCGTTCGTCGCGTCGTAGGC947727
947728GGGTCCATCCCCGCGTGCGCGGGGAGCAGGCAAGCCTCGCCGTGCAGGTTACCGACGAGTT947788
947789GGGTCCATCCCCGCGTGCGCGGGGAGCAGGAACACGAGACGCCGGACCCGGACCCGGACCC947849
947850GGGTCCATCCCCGCGTGCGCGGGGAGCAGCTCGTCATCGGCGGGGACGAGGGCAGCCGGGC947910
947911GGGTCCATCCCCGCGTGCGCGGGGAGCAGCACGCCGTGCGGCCGTCGACGGCGCCCGGGAC947971
947972GGGTCCATCCCCGCGTGCGCGGGGAGCAGCGGAGGCCGGCGACGCGGCCCACTGACCGGTC948032
948033GGGTCCATCCCCGCGTGCGCGGGGAGCAGACGCAGCCGTCTTAAAAACGGACAAAGTGCGG948093
948094GGGTCCATCCCCGCGTGCGCGGGGAGCAG948122
Left flanking sequence : Till position 947667 (length bp)
TTGCATTGACGGCCCGTGCGGGAGTGTCAACGGTCCCTGAAAACTGACCCTCTACGGGAAACCTGGGGTC
AGTCTTCAGGGAACGCGACACGGCGTGCGG
Right flanking sequence : From position 948122 (length bp)
GCTCGCTGACCTGGGGGTTTATCTAGAGGGAAAGCCGTCCTGAGCAACAAATGAAGATTCGGACATTTCC
ACCATCTGCCGAGCGAGAAGCCTGTGTGCA
Print the CRISPR sequence : From position bp To position bp