Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011663_3                                                                                                                 top


Strain : Clostridium sporogenes GCF_001020205 RefSeq :NZ_CP011663 (chromosome circular)
CRISPR id : NZ_CP011663_3
DR consensus (23 bp) : CCACTACCACCACATTTATCACANumber of repetitions :4
Begin Position : 3348436 End Position : 3348629

3348436CCTTTACCGTGACATTTATTACATGGGTTTTCTATAACTTTC3348477
3348478CCACTACCACCACATTTATCACAGGAAGTTTCTGTTACCATACTTCCTAATATAGTGTTCTTTTGAATTCTAATTCTT3348555
3348556CCAGTACCACCACATTTATCACATGTTTTTGGACTTGTTCCTGGTTTTGCA3348606
3348607CCGGTTCCATTACAATTGTCACA3348629
Left flanking sequence : Till position 3348436 (length bp)
ATTGCTTCCTGGTTCACCTTGTCCCCTTAACGGAATTACATTTCCTGTATCTACCCCTGCTGGTATTTTA
ACTTTAATCTTTTTGTTTTTTCTAACTTTA
Right flanking sequence : From position 3348629 (length bp)
ATTTTCATGTTTATTTACAGATATTTCTTTCTCAACTCCAAATACCGCTTCTTCAAAGGTTAAATTAATA
GCAGTTTCTATATCCGCTCCCCTTTGAGGT
Print the CRISPR sequence : From position bp To position bp