Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011995_3                                                                                                                 top


Strain : Porphyromonas gingivalis GCF_001263815 RefSeq :NZ_CP011995 (chromosome circular)
CRISPR id : NZ_CP011995_3
DR consensus (35 bp) : TTGGGAATACCCTTAGTTAGAAGGGTGGAGACAACNumber of repetitions :6
Begin Position : 924251 End Position : 924615

924251TTGGGAATACCCTTAGTTAGAAGGGTGGAGACAACTCCCATTTTTGAGCCAAATCTGATACAAATG924316
924317TTGGGAATACCCTTAGTTAGAAGGGTGGAGACAACTACAACATCTTTAGTAATTTCTTTAGTAATG924382
924383TTGGGAATACCCTTAGTTAGAAGGGTGGAGACAACGTTGTCCCAAGCCTGAACGGTAGCGTTGTCG924448
924449TTGGGAATACCCTTAGTTAGAAGGGTGGAGACAACAAACGCATCGTTATAAGTTTTTGTGATTGCA924514
924515TTGGGAATACCCTTAGTTAGAAGGGTGGAGACAACACCTTTTCTTCCACATCCTCAGGAGCAGGAG924580
924581TTGGGAATACCCTTAGTTAGAAGGGTGGAGACAAC924615
Left flanking sequence : Till position 924251 (length bp)
TAATTCGGAAAATTCTTCCGATTCTCGACCCTGAAAATAGATTTTTTGGAAAGCTTTTGAATAATATGTC
TCAACCTATCAATGACTTATAAAGGGTCGG
Right flanking sequence : From position 924615 (length bp)
TATTATTCCGAAAGGAGAAAGAGGGGAGGTTGTGCTATTGATGGGGAAGTATTCCTAAATTAGCGATTGC
TAAAGTGATGGAAGATGGATAGGAGGATCG
Print the CRISPR sequence : From position bp To position bp