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CRISPRs details
NZ_CP012294_2
Flanking alignement tool
Page manual
  
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NZ_CP012294_2                                                                                                                 
top
Strain :
Pediococcus damnosus GCF_001611155
RefSeq :
NZ_CP012294 (chromosome circular)
CRISPR id :
NZ_CP012294_2
DR consensus (36 bp) :
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
Number of repetitions :
35
Begin Position :
1237641
End Position :
1239921
1237641
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
AGGTATCGTTTGTAATCCTACGAGTGCAAT
1237706
1237707
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
GTGATACCAGTGCCGTTTAACGCTGACATC
1237772
1237773
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CATAAAACATGATAAAGACGTTCAGCATGA
1237838
1237839
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TATTATATGCAGATCCTAATGTTGAACTAA
1237904
1237905
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CACTGATTAGTTTGGTCTCACAATCCAAGC
1237970
1237971
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
ACGCAAGACCAAATTGATTCTGGCCCAGCA
1238036
1238037
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
ATGGACGTTCATGTATGGCTCATTCTCAAA
1238102
1238103
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
GCCCGTTTGGGTTTGGCCTTGAACATAATC
1238168
1238169
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TGTATTACAGGGCTTACATTGCCTACGCGG
1238234
1238235
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
AAAAGTTTGTGCTGCCAATGGCAGGAACGT
1238300
1238301
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CATTAACAATCGCAAACTCACCATTTCCTT
1238366
1238367
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
GTTTGTCCGAACCGTGCGTCATGCACATCT
1238432
1238433
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TACTCAATCGCAAATTGATTCCGCACCAGA
1238498
1238499
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TGTTAGGCCTTCCACAGTAAAGCTAATTTT
1238564
1238565
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
ATTCGACTATCCCGGATTGATTGGAGATTC
1238630
1238631
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CTCGGTACGCAATAACCTTGCCGCCACGTC
1238696
1238697
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
ACCCTTCGATTACTAACCCGCTTAATCTGA
1238762
1238763
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TATGATGATTGCGTGCAGTAGGTGGTATAC
1238828
1238829
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
AAAACGTTGATTGATAACGGTGTAGCAGAT
1238894
1238895
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGT
GGTAAGACTGTTTACAGTCCCTCGATAAGT
1238960
1238961
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TCATCTCCTCCGATTGCATCTGTATCTAGT
1239026
1239027
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TGCCGACATTGCCGAGACCCCAACCAGCTT
1239092
1239093
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TTAGCTTATGCCAACATTGGTGGTAATGAT
1239158
1239159
GTTTTAGAAGAGTGTCGAATCAATATAGTTGAGAGC
TTCGCTTTCTGTTGAATAGTAATATGTGTT
1239224
1239225
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
GCCATTGGTGTCTAATGACTGTGGTGCTGT
1239290
1239291
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CGTGTACATGATGTGGTCGTCCCCAATGTT
1239356
1239357
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CTAGATACAGGTAATCTGTGGGTATTGTGTG
1239423
1239424
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAAAGC
TTCACCTACAATTAATGTATTACCCTTTAA
1239489
1239490
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TAATAACGGAGCGTTAAAGGCTTGGAGTTA
1239555
1239556
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CGGGGTCGCTTCCACATATCCTGTGGTCCA
1239621
1239622
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CCGTTGGTCCGACAACTTCCGCAGCTCTTT
1239687
1239688
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
CCGGTCGTCGTCGGTTAAGTACCACTCATG
1239753
1239754
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
GTGTGGCGTTGGCTAACGTTGTTGAGGGCA
1239819
1239820
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGAGC
TAATGTAAAAAAGCTTGACTGTATACACAT
1239885
1239886
GTTTTAGAAGAGTGTCGAATCAATATAGTTAAGGAA
1239921
Left flanking sequence : Till position 1237641 (length
bp)
TAATCACGAAGAATTCGATAAATGCCGTTATTGCTACGTTGATCAGGATTTTGTTGATTGGCGTTATTAA
TGTCTATGAGAGTAGCATTATAAAAAAACG
Right flanking sequence : From position 1239921 (length
bp)
TCAGGAGCGGCTTGACGCATTGAGGTAAAATAGTTTTAATTATTATCGTATATATAAAATAAATGAACCT
CAATTGCACCAAAATCTGAACTTCATTAAA
Print the CRISPR sequence : From position
bp To position
bp