Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012410_2                                                                                                                 top


Strain : Leptotrichia sp. oral taxon 212 GCF_001274535 RefSeq :NZ_CP012410 (chromosome circular)
CRISPR id : NZ_CP012410_2
DR consensus (30 bp) : ATTTTAATAGTAGCAGAGTGTAATGTAAATNumber of repetitions :2
Begin Position : 586688 End Position : 586798

586688ATTTAATAATTAGAAGAGATACATGCAAATAAAATTAATATGATAAGAAATGATTTAAATAAATTTTTTTAATATTTTAAA586768
586769ATTCTGAAAGAAGTAAAATATAATAAAAAT586798
Left flanking sequence : Till position 586688 (length bp)
TTACATGACTAAGGCATATGAAATAAAAATGAAAACTTAAATGTTGTCTAAAATATTTGAATTAATTTAA
AATTACTATATTTCTAGAGATAAAAAAATA
Right flanking sequence : From position 586798 (length bp)
AGATATATAGGAGGAGACAATGGCAAAATTCATAGAAGATATTAGAAATAATTACAGAAAGTTAGAATGT
GAGTTAGTCACACAGCTTAGTTATCAAGTC
Print the CRISPR sequence : From position bp To position bp