Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012590_42                                                                                                                 top


Strain : Actinomyces sp. oral taxon 414 GCF_001278845 RefSeq :NZ_CP012590 (chromosome circular)
CRISPR id : NZ_CP012590_42
DR consensus (37 bp) : GTCTCAATGCACCTACAGGTGCGTGGTGCTCCCTGACNumber of repetitions :5
Begin Position : 3024712 End Position : 3025036

3024712CCCTGAACAACATTCCAGGTGCGTGGTGCTCCCTGACTTCGAGAGGAGCGACAAGACAGGAACTGTCT3024779
3024780GTCTCAATGCACCTACAGGTGCGTGGTGCTCCCTGACGCCCTCGCCTGGCTGATCAACGGGGCCGTCGTGAT3024851
3024852GTCTCAATGCACCTACAGGTGCGTGGTGCTCCCTGACCGCTCAATCTCGACAATACCTCATGGTCCGCCACAGG3024925
3024926GTCTCAATGCACCTACAGGTGCGTGGTGCTCCCTGACTACCAAGGTGGCCGGCGGCGAAAAGCTTTCGGACTTC3024999
3025000GTCTCAATGCACCTACAGGTGCGTGGTGCTCCCTGAC3025036
Left flanking sequence : Till position 3024712 (length bp)
CCGACCCGCCGATCCCGCCGCGCCCGACCCCCCGACGCACCCGGAGGCGACCCGAGCAGACCGCCACCAC
GACCTTCACGCTCCACGCCTTCAAAACCAC
Right flanking sequence : From position 3025036 (length bp)
CCCTGCCCTCGGGAGCGGCGGTATGACGCCACTTCGAGGGCCCGGAGCGCCACCGGCCCCGGGAGCACCC
CTCCGGACCGGCCAGCACCGGGCCCAGAGT
Print the CRISPR sequence : From position bp To position bp