Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012712_1                                                                                                                 top


Strain : Parageobacillus thermoglucosidans GCF_001295365 RefSeq :NZ_CP012712 (chromosome circular)
CRISPR id : NZ_CP012712_1
DR consensus (31 bp) : AGTTTGTATCTTACCTATGAGGAATTGAAACNumber of repetitions :3
Begin Position : 2271 End Position : 2433

2271GGTTTGTATCTTACCTATGAGGAATTGAAACATATCCTGCATATTCTCCGCATACGTCAGAGTTAG2336
2337AGTTTGTATCTTACCTATGAGGAATTGAAACATTTCAACCTCAAGGCTTTCTCCGTTTGCCTGTTC2402
2403AGTTTGTATCTTACCTATAAGGAATTGAAAC2433
Left flanking sequence : Till position 2271 (length bp)
TAGGAATCTTCATCATTCCCATATATTGACACAATTTTCTTAATAGCGTATACTTTATGTAACATTTCAG
AAAAATGCTGATACATCAATATTTTTTTTG
Right flanking sequence : From position 2433 (length bp)
CGATTCACCCGATCAACAAGAGTTTTAGAACCAAAATCATTTGTATCTCCCTATAAGGAATTAACCCTCT
CTGTCCGCTGCCTGACTGGCCTTTGAAGTT
Print the CRISPR sequence : From position bp To position bp