Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012946_3                                                                                                                 top


Strain : Blastochloris viridis GCF_001402875 RefSeq :NZ_CP012946 (chromosome circular)
CRISPR id : NZ_CP012946_3
DR consensus (37 bp) : GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACNumber of repetitions :16
Begin Position : 1769474 End Position : 1770632

1769474GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACCCGGTGCAGCACCTCCGCGCCGTCCGGCAGCGCCGG1769546
1769547GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACATCAAGACCCTCAACAAGGCGGTGGAGCTGACGCT1769618
1769619GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACAGGCGCGGTGAGCGAAAATCCGTTGTCGAGGGTGAGTTG1769694
1769695GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACCGCCGTCACCTCGGACGCCCGCCGGCCGCGCACGCC1769767
1769768GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACTCCCTGGCCTCGGCCGAGGCGACCGCGGTGCTGGGGGGCGC1769845
1769846GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACGCCGCATCTTCAGCGGTCGGCGTCACACGACCTTCTG1769919
1769920GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACGTCTGTGCATCCGCAAAGCCAGCCTTCGGTCGTGGCGT1769994
1769995GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACCGCCAGCGGCGCTGTAATCAGCTCGCCGGTGTCGAG1770067
1770068GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACCGTGACCGACCCTGGCCATGTCCATCCCAATTCAGTTCCAA1770145
1770146GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACTAACACGCGTTGGCTTGTTGAATACTGAGCCTGACAAGC1770221
1770222GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACTGCTTATGAGCCGCTCAATGGCCGTTGATAGGTGGTC1770295
1770296GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACTTCTCGGCCGCCGCGTTCCACCCCTTGTCCCAAACGCC1770370
1770371GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACTGGTCTGGTAGCTTTGGTGTGTTGGACAGGTCACCTAG1770445
1770446GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACGCCGCCCACCACTGCCTTGACGTTTTCCCAGTTGCGGAT1770521
1770522GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATACGCAGCGTATCGCTTGATGCCGGCAAGTCGATTGGAAG1770595
1770596GCTTCAATGAGGCCCGAGCGGATTACTCGGGGAATAC1770632
Left flanking sequence : Till position 1769474 (length bp)
TTGACCGTCGCGATGAAGCCCAGCGCCGTCACCGGGCTGACGCGCGGATTACTCGGGGAATACCGCGATA
GAGCCGCGCCCGCACCGACGATGTCGCCGC
Right flanking sequence : From position 1770632 (length bp)
CCCTGCCAGATTTTTGCTCGATTACGCAGGAGAATAGACAGGTACTTGCGAGAGCTGCGTCAACGGTCTC
GCCTCGCAACGTGCGACAAGGCATGAACGT
Print the CRISPR sequence : From position bp To position bp