Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012946_6                                                                                                                 top


Strain : Blastochloris viridis GCF_001402875 RefSeq :NZ_CP012946 (chromosome circular)
CRISPR id : NZ_CP012946_6
DR consensus (32 bp) : GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACNumber of repetitions :52
Begin Position : 2460356 End Position : 2463755

2460356GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACAGCCGGCGGATGTCGCACTCGATGTCGGAAAGC2460420
2460421GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGACGGTGCCGTCAGACTGTTGCGTCATCGATAGG2460486
2460487GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGCGCCCGCGCCAGGCAGTTGCGTGACGAGCTC2460551
2460552GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGCCCGGTACATGAAAGAGGCCATCAGCAACGGTG2460617
2460618GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGATTGCCGCCGCGCCGGTGGTGGTGCACGGCCA2460683
2460684GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACAACAGCGTCGTGGGTCTTGACCGTGGCATAGC2460747
2460748GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGGGAGCACATTCAGCACGAGGTGCTGGTCGACA2460813
2460814GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACATGCCCCAGCCGAATTTCTCGTTCTGGGTATCGG2460879
2460880GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGGACTCGGCGCGGTCGACTGGGCCACAGCCGAGCC2460946
2460947GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCCCGGCTACTACTTCGTCCGGCTCGACCTCGCCGAC2461014
2461015GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACAAAAACCGCGGTGACATTTTTCGCGTGGTCGAGG2461080
2461081GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACACCTCGGCGATCTCGACCTTGGCGACCTCGGCCTC2461147
2461148GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGCCATGCCTCGCCGTCTCGGCGGTTTTGGTCGT2461212
2461213GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACATCTCGACCAGATCGAGCTTACCGTCCTCGCCGA2461278
2461279GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACATTGCCATGATCGTGTTCCTTAAGCGGTGCCAG2461343
2461344GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACTTGGGGGCCTTGGGGCCGGTCCCCGTGAAGATGC2461409
2461410GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACTCGTTGCTCCGGCTCGACATCGCCGATCCGCGATG2461476
2461477GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCAGCATAGGGCCGGTCAGGTTGACCCCGGCGAGGG2461543
2461544GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACACCTCCGAGACCTTCGCGAAGGGCGCCGCCTAT2461608
2461609GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACATCTACCACGCGCTGACACGGTCACCTGCGATC2461673
2461674GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACTCGATCTCCGCCCGCCAGTGGGCATCGCGCTCCG2461739
2461740GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACTCGATGATGCCGATCGGCGGGTGCTATTTTGTGC2461805
2461806GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGCGTCGGCCGCACGGCCTGATCGATTTCGTCGGC2461872
2461873GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCTCCTCACCGCACCCGAGATGGCGCAGCACGACGC2461939
2461940GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGACGGCAAATCGAACAGCAGCAACGCGCGGTCGG2462005
2462006GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCCCTTGGCCGGCGCCCAGGCCGCCTTCCGGCGCGC2462072
2462073GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGGTGTCGCTCGCTGACCCGGTCGGCGTCACCAA2462138
2462139GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGGCGACCGCCAGCCCGGTCAGCGGCTTGCATGGC2462204
2462205GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGTCGTCGCTGTCGCCATCGGCGATGACGCGGATC2462270
2462271GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGCACGAAGCGGTCACGCGTCACCCGCTCGGCCAC2462337
2462338GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCTGGTCAATTCGTCGTCGTCCTGGTGGCGGTCGG2462403
2462404GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGGTTTCAAATTTGCGCGACATCGTGGCCCCCGGCC2462470
2462471GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACAGACTGCCGAGAAGTATGCCGGGCGTGGAGACGGT2462537
2462538GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACTATGAGCGACTGCACGCCAAGTGCGATAACACTACC2462605
2462606GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACACGTTCTCCCAATTGCGCACGATCAGCGCCGCGC2462671
2462672GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCTCGCCGCGCCAATCAAACTCCTCCGCTTGAA2462735
2462736GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGGCGTAGACCTGCGACACCTTGGTCACCTGTACC2462801
2462802GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGGTACAAGCCGGTGCGGCTGCTCTGGCCAAATGG2462867
2462868GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACTTTGATTGCGATCGCCACCCCGCGCTTGGCCGCCAG2462935
2462936GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACTGCTGACCGGCTCAGCACGCTCAAGAGCGTTCTG2463001
2463002GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGCGCATGCATCGAGATAGCCTCGGCGTCGTGA2463066
2463067GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGATCCGTGACATGCCCCGACAATAATGGGCAA2463130
2463131GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGAAGTCGAGCCCGCCGTCGTCATCGCCGCGGCAGC2463197
2463198GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGCCGCCATGGTGTCGTCGCGCGCTGGCCTGGG2463262
2463263GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACAGCGCCAGCACATAGGCGCCGCTCTCGCGCCGG2463327
2463328GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGTCGTCCTCGCCAGCATTTGCAGCTGGGGTGCTTG2463394
2463395GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCCTAGAGAGAGATTTGGGGGTCAAGAACAGCAAGCG2463462
2463463GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACCGGTCGCGGACGGCCTTGGGATCCTCGACGATACC2463529
2463530GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACACCTCACGCGCTCCGGCGCCTCGGGTGATCGAGC2463595
2463596GTCGCCCCTCGCGCAGGGGCGTGGATCGAAACGACAGCCCGTCACGGGCCGCGACCGCCCGAACC2463660
2463661TGTCGCCCCTCGCCAGGGGCGTGGATCGAAACAGGAAGCCGCCCGCCACCTGGCGGGCGCTCG2463723
2463724TGTCGCCCTCGCGCAGGGGCGTGGATCGAAAC2463755
Left flanking sequence : Till position 2460356 (length bp)
GAAATTGGCGACACGTGCGGTCGCCGGGCGACCTCGCGCACCGAGGTTCGCGCATCCATGACCGTTTCGA
ACGTCAGGTTCGTGCGCTATCTGTAGGGCC
Right flanking sequence : From position 2463755 (length bp)
ATGTCCAGCGAAGCGCGTTCTCAACCGTTCGCGACAAACGGTTTCATGATGGCGCCGCCTTCCTCAAGAC
CGAGAGCGGCTTCTGTGTCCTGCTGGTCAA
Print the CRISPR sequence : From position bp To position bp