Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012959_3                                                                                                                 top


Strain : Aggregatibacter actinomycetemcomitans GCF_001594265 RefSeq :NZ_CP012959 (chromosome circular)
CRISPR id : NZ_CP012959_3
DR consensus (32 bp) : GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACNumber of repetitions :7
Begin Position : 2009487 End Position : 2009916

2009487GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACTTGTAAGTCTGAAATAATACCCAATGCACTCGCTAC2009554
2009555GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACACCAATACAAACACATTTATGCTTATCTCTGAT2009619
2009620GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACTTGTAAGTCTGAAATAATACCCAATGCACTCGCTAC2009687
2009688GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACCTTGTACTGTTCCTAAAGAAATTCAAAAGGGCA2009752
2009753GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACCTTATGTAGGTTATATATTAGCACCTGTTGCTGC2009818
2009819GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACACTACCGGCACCTGGAATTGGTTAGCCAATACCC2009884
2009885GCAGCCATCTTCGCATGGCTCTGTTTTGAAAT2009916
Left flanking sequence : Till position 2009487 (length bp)
GAAGATATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATGCAGTAAGTAATCT
CCTGATTTTCCTTGTTTTTTCAGATAGGGA
Right flanking sequence : From position 2009916 (length bp)
AGGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGTTTTTCT
TTTCCCGCAAACCAACACAAAACTCCTTGC
Print the CRISPR sequence : From position bp To position bp