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CRISPRs details
NZ_CP013050_3
Flanking alignement tool
Page manual
  
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NZ_CP013050_3                                                                                                                 
top
Strain :
Thermococcus barophilus CH5 GCF_001433455
RefSeq :
NZ_CP013050 (chromosome circular)
CRISPR id :
NZ_CP013050_3
DR consensus (30 bp) :
GTTCCAATAAGACTCTAAGAGAATTGAAAT
Number of repetitions :
26
Begin Position :
1301658
End Position :
1303400
1301658
GTTCCAATAAGACTCTAAGAGAATTGAAAT
AACAATTCAAACAGCAAAGAACGCTACGCAGGTGGTGA
1301725
1301726
GTTCCAATAAGACTCTAAGAGAATTGAAAT
TATAAATAAGTGAGGGTCCAGGCTTAGCAATCACATGAAAA
1301796
1301797
GTTCCAATAAGACTCTAAGAGAATTGAAAT
GTGAACGTTGTATCATCAATTGAGAAGCCTGAGCC
1301861
1301862
GTTCCAATAAGACTCTAAGAGAATTGAAAT
AGGGTATTGTCGGGAAGATGGGGGCGATGTTCAGCC
1301927
1301928
GTTCCAATAAGACTCTAAGAGAATTGAAAT
ATTGGGTTGAATGAACCAGTTCTGTTCGTTGGGACGTGG
1301996
1301997
GTTCCAATAAGACTCTAAGAGAATTGAAAT
AGCTCAAGAGGGGGTGTTATCTGATGGGATTAACAAA
1302063
1302064
GTTCCAATAAGACTCTAAGAGAATTGAAAT
CAAGTTTTGTAGCTCCTGCTCCTGCTTAATGCCTAACTT
1302132
1302133
GTTCCAATAAGACTCTAAGAGAATTGAAAT
TAATACATCTTTATTGTAGTTTGTGAACTTCCAGGAA
1302199
1302200
GTTCCAATAAGACTCTAAGAGAATTGAAAT
CTGGCTCCTTGTTCCAATAGAGCCAAGCCGCTCCTGCAA
1302268
1302269
GTTCCAATAAGACTCTAAGAGAATTGAAAT
GAGTTTTGCATTCACACTCACTTCTACAGCGAGGAGT
1302335
1302336
GTTCCAATAAGACTCTAAGAGAATTGAAAT
GTGCTGTGTTGGTAAATCCAAGCTTTACTTCGCCCT
1302401
1302402
GTTCCAATAAGACTCTAAGAGAATTGAAAT
CAAAGACCTCCTCGGGTGTCGGAGTATCCCCGTTTAT
1302468
1302469
GTTCCAATAAGACTCTAAGAGAATTGAAAT
AGGCTTATGAGGTTCTACAAGGAATTAAGGGAGATTGA
1302536
1302537
GTTCCAATAAGACTCTAAGAGAATTGAAAT
CGAGGATCACTATCTAAAAGCTCGGTGCTCAGATTG
1302602
1302603
GTTCCAATAAGACTCTAAGAGAATTGAAAT
GAGATTAAGGAGATTTTGGAAAGAACACAAGACTGGGATCCAGA
1302676
1302677
GTTCCAATAAGACTCTAAGAGAATTGAAAT
ATTTCAAAGCTCTTTGCTTCCATTCTTCTCTTTCCCTC
1302744
1302745
GTTCCAATAAGACTCTAAGAGAATTGAAAT
GTCGTGTTTGTTCTCACGAAAAAGAACCGCAGCCTCGTAGTAGGAGG
1302821
1302822
GTTCCAATAAGACTCTAAGAGAATTGAAAT
AAGAAAAGCCCAAAGAATTATTGCCCGTAGAACCAGAG
1302889
1302890
GTTCCAATAAGACTCTAAGAGAATTGAAAT
GAGGAAGAAGAGAAAAGTAAAGAAGAAAAACCGCCAGAGACAG
1302962
1302963
GTTCCAATAAGACTCTAAGAGAATTGAAAT
AGCTTGCGGGCTTTTCTTGCAACATCAACAATACGCTT
1303030
1303031
GTTCCAATAAGACTCTAAGAGAATTGAAAT
ATGAAAATTGCTTTGTAAATCAGCCGTTGGAGGGAATA
1303098
1303099
GTTCCAATAAGACTCTAAGAGAATTGAAAT
CGATTACTATCACGAGCTGATGATGCAATACGAAGAC
1303165
1303166
GTTCCAATAAGACTCTAAGAGAATTGAAAT
TTTCAGTCATTATGAGGACTTCCTTGAGTGGGCGCTCG
1303233
1303234
GTTCCAATAAGACTCTAAGAGAATTGAAAT
AGAGTCTCAAAGAACATCTCAAATGCTGAATTATATGA
1303301
1303302
GTTCCAATAAGACTCTAAGAGAATTGAAAG
CTTCTTATCACCGTTGTAGTGCTCCAAAATCTCTTCCCA
1303370
1303371
GTTCCAATAAGACTCTAAGAGAATTGAAAA
1303400
Left flanking sequence : Till position 1301658 (length
bp)
AAGGCTTGTTCTCTCTGCATTACTAACCCTCCAGCGAAAAGCTTTTATAACCCAAGCGTTCTTATATTCT
TATTGGAGAAATAGAGCAAAATTGCGCCCT
Right flanking sequence : From position 1303400 (length
bp)
GACATGAGACAAAAGAATTAGGGGGTGATAAGTATGAATTGGGCTGAGAAATTATTAAAGTATGGTCTGC
ACAAAAAAGGATACTCAGAAGTTACTGCAG
Print the CRISPR sequence : From position
bp To position
bp