Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013068_1                                                                                                                 top


Strain : Pannonibacter phragmitetus GCF_001484065 RefSeq :NZ_CP013068 (chromosome circular)
CRISPR id : NZ_CP013068_1
DR consensus (36 bp) : AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACNumber of repetitions :22
Begin Position : 797882 End Position : 799304

797882AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACGCAGAATTGGCAGGTGTACCCACATGCCGG797947
797948AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACGATCGATGGCACGTTCCCGGATTACCGCCG798013
798014AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCAGGGCCTTGAGCGACCAGTAATCAACGTCC798080
798081AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCCAGCGCGGACTCCGGAACACACAGAACGC798146
798147AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACTGCGGGCCTCGTCACTGCCGCGCATCTCCG798212
798213AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACAGTAATGCGATCCGCGCCAGCCGCCGAGGC798278
798279AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACGCCGAAGATCGGATGGGTGAAGTTCCGCGA798344
798345AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACGCTCCAAGACCAGGAAATAATCTTACAACA798410
798411AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCCATGGCGATGCCTGCCGCTGCGCCCACCA798476
798477AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCGCCAGCGCCAGCCATGCGGGGTCGGGCGG798542
798543AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCACAACAACACACAACACCGCCACGAACGT798608
798609AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACGGCACGGAAGGTGGTAAGAGATGGCGCCGC798674
798675AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACTTTCGTCGGTCTTCGGCGGTGGCGGGGCTG798740
798741AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCCACCGGCACCTGCACTTCGGTGCCATCTG798806
798807AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACTGCCAGAGGTAACGAGTCCCTTCAGGGCTC798872
798873AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACGGATCGGATGAGATCACGATCCGGGGCGTG798938
798939AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCCATCGCCGGGGGTGAACATGCCGTCCAGA799004
799005AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACGTAGCCGACAAGGCCCAGCGCGCGCAGTCG799070
799071AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCAGGCTGTTGACCTGATCAGGCCTGCTGCA799136
799137AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCCCGATCTTCGCTTTTCCAGACATTGTGCC799202
799203AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAACCTTGACGGCTGCCGCCCGATTCCAGGCTGA799268
799269AGCTTATCAGTTCAGAAATCGCGGTCCAGCCGGAAC799304
Left flanking sequence : Till position 797882 (length bp)
AAAACCCGGAACAGCTCGCCCTGTTCTGATGGTTCTGGCCGTTTTGCGCACAGTGAACTGCCCAATTCCC
CTTTTATTTCAAGGAATTGGACAGGCACCT
Right flanking sequence : From position 799304 (length bp)
GGCAGGCGGGATTTGCGGCGCAATATGGGCGTCCCCGTTTAAATCTGGCTAAGGAAACGTAACGGGGCTT
TCCTGTCCTGAGGGCTCAACAATAACCATC
Print the CRISPR sequence : From position bp To position bp