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CRISPRs details
NZ_CP013249_3
Flanking alignement tool
Page manual
  
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NZ_CP013249_3                                                                                                                 
top
Strain :
Vibrio parahaemolyticus GCF_001879585
RefSeq :
NZ_CP013249 (chromosome circular)
CRISPR id :
NZ_CP013249_3
DR consensus (28 bp) :
GTTAACTGCCACACAGGCAGCTTAGAAA
Number of repetitions :
29
Begin Position :
826587
End Position :
828294
826587
GTTAACTGCCACACAGGCAGCTTAGAAA
CTTGGATTTCTGAAAGGTAATGACGGCTTTCT
826646
826647
GTTAACTGCCACACAGGCAGCTTAGAAA
AATGTCGCGCATAGCCTCGATAGTTTCGACAG
826706
826707
GTTAACTGCCACACAGGCAGCTTAGAAA
AAAGTGACGAAGATTATTCAAAGCTCCATCCC
826766
826767
GTTAACTGCCACACAGGCAGCTTAGAAA
AAAGCCAAAAGGCGCGTGAAGTGTCGAGAAGT
826826
826827
GTTAACTGCCACACAGGCAGCTTAGAAA
ACAGAGTGAAAATAGTCCCGACGATGCCGCCA
826886
826887
GTTAACTGCCACACAGGCAGCTTAGAAA
TCCATCTCCGGCCAATAAGACCAGTATTCAAC
826946
826947
GTTAACTGCCACACAGGCAGCTTAGAAA
AGAAAGTAAATCCTCAAGAGATAGAGATTCAT
827006
827007
GTTAACTGCCACACAGGCAGCTTAGAAA
ACCGAGGAAAGTCAGTGGACTCAGAACGGGTT
827066
827067
GTTAACTGCCACACAGGCAGCTTAGAAA
TGAATACGGCGATAAAAACGGTAGATTACATT
827126
827127
GTTAACTGCCACACAGGCAGCTTAGAAA
AAATAAAGTGGCAGATACCAGCTCAGTTTGCC
827186
827187
GTTAACTGCCACACAGGCAGCTTAGAAA
GTATGTAAATGGCTGCGCTACAAGACAGATAT
827246
827247
GTTAACTGCCACACAGGCAGCTTAGAAA
ATTCGCAAACCTTGCGCTATTTGGGTTTGTTC
827306
827307
GTTAACTGCCACACAGGCAGCTTAGAAA
AGACACTAGACCTGTTCAGGGTGAGCATGAGC
827366
827367
GTTAACTGCCACACAGGCAGCTTAGAAA
AACAGGGAGAATATAAAAATACTGCCGATAAC
827426
827427
GTTAACTGCCACACAGGCAGCTTAGAAA
AGAAAATGAAAAATGTCTCCGTTTTTTAAATC
827486
827487
GTTAACTGCCACACAGGCAGCTTAGAAA
TTGTTCAAATGGGAGCAGCAGGAACTACGCAG
827546
827547
TTTAACTGCCACACAGGCAGCTTAGAAA
ACAGCATTAGGCACTACAGATTTAAACGATTT
827606
827607
GTTAACTGCCACACAGGCAGCTTAGAAA
TCCAAAGGACTTTAATTAAGAGTGGTGAATAC
827666
827667
GTTAACTGCCACACAGGCAGCTTAGAAA
AGGTAATCATGTGTCGCATTCATTACCTCCGC
827726
827727
GTTAACTGCCACACAGGCAGCTTAGAAA
AGAAAGTAAATCCTCAAGAGATAGAGATTCAT
827786
827787
GTTAACTGCCACACAGGCAGCTTAGAAA
ACCGAGGAAAGTCAGTGGACTCAGAACGGGTT
827846
827847
GTTAACTGCCACACAGGCAGCTTAGAAA
TGAATACGGCGATAAAAACGGTAGATTACATT
827906
827907
GTTAACTGCCACACAGGCAGCTTAGAAA
TGGTTGCGTCACGCTCTGGTATTGCTGCTCTG
827966
827967
GTTAACTGCCACACAGGCAGCTTAGAAA
AATCTTTGCGGAACTCTTCAAAATCTTCAAAC
828026
828027
GTTAACTGCCACACAGGCAGCTTAGAAA
ATTCGCAAACCTTGCGCTATTTGGGTTTGTTC
828086
828087
GTTAACTGCCACACAGGCAGCTTAGAAA
ATACTCAGGCTTCTGGCCAGAAGCGAAAACCA
828146
828147
GTTAACTGCCACACAGGCAGCTTAGAAA
AAACCTTCCTAGTAAAATTATCGCCAGCATAA
828206
828207
GTTAACTGCCACACAGGCAGCTTAGAAA
AAGAACGCTTAGAACGACGTTTAGACATTTTT
828266
828267
GTTAACTGCCACACAGGCAGCTTAGAGA
828294
Left flanking sequence : Till position 826587 (length
bp)
TTAAAATACATAGAGTTACAATAGATAGAATTTGGCAAGGTAAAAACATGATTTTTATCCTAACTATCTG
TTGTAACTTTCTTTTATTGATTTATTCTAT
Right flanking sequence : From position 828294 (length
bp)
GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAG
ATATTATTCTCATAATATTCAGCCAAATAA
Print the CRISPR sequence : From position
bp To position
bp