Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013264_3                                                                                                                 top


Strain : Sphingobium baderi GCF_001456115 RefSeq :NZ_CP013264 (chromosome circular)
CRISPR id : NZ_CP013264_3
DR consensus (36 bp) : ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACNumber of repetitions :19
Begin Position : 3394477 End Position : 3395699

3394477ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACTCGCGCGTGCGGCATCCCCTCCATGTCGCC3394542
3394543ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACGGCCTTCCATGAGCGGTATTGATCCAAAGC3394608
3394609ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACTGCTATGCTGCGGCACTGATTTCATCGGAC3394674
3394675ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACCCATCAGAATAGCGTCTTTCAGCAGCGCGG3394740
3394741ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACGCGCTTCCGCCAGTTCACGCGCGCGCTGC3394805
3394806ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACGCTTGGGCGTCAACCTCCACCTCTTACCGA3394871
3394872ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACCCATCTGGTGCTGTCGAGCGTGGCAGTCGT3394937
3394938ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACGCCTCAAGGCGCTCCTTTCTATGTCGTCAA3395003
3395004ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACGAGATGACCTGCTTCCGGCTGATGGCAGCG3395069
3395070ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACCGAAGCGGTGGGCGACCCCGGCACAGGCAA3395135
3395136ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACCCTGCGCCCGCAGTGGCCAACCCGCCGCCA3395201
3395202ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACTCCAATACCATTCAGGCAGTGGGCCGCGTT3395267
3395268ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACTTGTGCTCAATGCACCTGTGCGAGGCCCTT3395333
3395334ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACACAACGCTGAGTTCGAGACGAAATTCTTCG3395399
3395400ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACTTGGAACATCGGTGATGTTTGTTGGGGTTA3395465
3395466ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACCTGCGCTGGCAGGGATGCGCGGGTGTGGAT3395531
3395532ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACACGACGAAGAACTGAGGGACGATCTGACGA3395597
3395598ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAACCGGATCGCTGCGGCATGTCGGGCAAGCGCA3395663
3395664ATCATAGCCGCTCAGAGATCGCGGTCCAGCGGCAAC3395699
Left flanking sequence : Till position 3394477 (length bp)
AAACCCCGATCAGCTCGCGCTATTCTAGCGATTCGCATGATTTTTGCGGCGACGGATCAACGGATATTGC
GTTGGTTTTCAATGCAGTATCCATTGATCC
Right flanking sequence : From position 3395699 (length bp)
TCATTGTGGCCGTGACAACACCGGCTAAAACGGGTCGAGCGGATCTGGCGGCGTGAAGAGCTCATGGTCC
CGCACCGGAAACGGCTGCACCGCCATATCC
Print the CRISPR sequence : From position bp To position bp