Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013477_4                                                                                                                 top


Strain : Pseudomonas aeruginosa GCF_001900195 RefSeq :NZ_CP013477 (chromosome circular)
CRISPR id : NZ_CP013477_4
DR consensus (29 bp) : CGGTTCATCCCCACGCATGTGGGGAACACNumber of repetitions :18
Begin Position : 4112483 End Position : 4113548

4112483CGGTTCATCCCCACGCATGTGGGGAACACATCGTCTCCAGCAGCACGCGGACGCGGTCCTT4112543
4112544CGGTTCATCCCCACGCATGTAGGGAACACTCTGCGGTGCTCGGGGCGGTCCGCTCCATCAC4112604
4112605CGGTTCATCCCCACGCATGTGGGGAACACCTGGTCAGCAACTGCAGCCAGGTGGCCCGCTG4112665
4112666CGGTTCATCCCCACGCATGTGGGGAACACAGGACGCATCGGTATTTGACGGCCTCTTTTAT4112726
4112727CGGTTCATCCCCACGCATGTGGGGAACACCGGAAGCTGGACGACGAAAGCTGGAAGCACAT4112787
4112788CGGTTCATCCCCACGCATGTGGGGAACACTGTTGGTGATCCGCCGACGTGGGCCTGGCGAC4112848
4112849CGGTTCATCCCCACGCATGTGGGGAACACTGCTCGCCGGGGCCGAAGCCGCTGACCTCGAA4112909
4112910CGGTTCATCCCCACGCATGTGGGGAACACAACATGATCTACCGCGGATCGCCGTGGGAGAC4112970
4112971CGGTTCATCCCCACGCATGTGGGGAACACCGTCTCCCAGTTTCACCTTATTGCCGCGCGGG4113031
4113032CGGTTCATCCCCACGCATGTGGGGAACACAAGTACTGCAACGACATCAGTCCGCGCTACGA4113092
4113093CGGTTCATCCCCACGCATGTGGGGAACACAAGCCTACAGACTGATTCCCACTGTTATCCCG4113153
4113154CGGTTCATCCCCACGCATGTGGGGAACACCGTACCGAGGAAATCACCCAGCGGGTGGAGGA4113214
4113215CGGTTCATCCCCACGCATGTGGGGAACACTACGCATCGACCTGCTCAGGATCGAGCTGCGC4113275
4113276CGGTTCATCCCCACGCATGTGGGGAACACTTCTGTTGGTATAGAACATTGCGACATATGGG4113336
4113337CGGTTCATCCCCACGCATGTGGGGAACACCTCAAGGCGGTCGCCTGGGTCGACAAGGTCGA4113397
4113398CGGTTCATCCCCACGCATGTGGGGAACACTGGAAGGCGTCGGGTCGGAGAACGAGGCGATC4113458
4113459CGGTTCATCCCCACGCATGTGGGGAACACTGTTGTCGCCGATATGCAGGGTTTCGCCGGGT4113519
4113520CGGTTCATCCCCACGCATGTGGGGAACAC4113548
Left flanking sequence : Till position 4112483 (length bp)
TGCCAAAGGGGAAATACAGGACAGCCAGGAATGTCGGCTTTTCAAGTGAACGGCTCGCCCCGTGCATATA
TCGCATCCTCGCTGCGCGAGCGTACTTCCA
Right flanking sequence : From position 4113548 (length bp)
ACTTACCGTACAGAATTGTTTTTAAAGAAGAAAAAACACCTCGAAAAATCTACCGCCTCATCCTCTATTC
CGTGGTCCGATCCAGAGGCTGGAATGCCAC
Print the CRISPR sequence : From position bp To position bp