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CRISPRs details
NZ_CP013615_1
Flanking alignement tool
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NZ_CP013615_1                                                                                                                 
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Strain :
Clostridium perfringens GCF_001579785
RefSeq :
NZ_CP013615 (plasmid pJFP838A cir)
CRISPR id :
NZ_CP013615_1
DR consensus (29 bp) :
TTTCAATACAACACTTGTTAAAGTTAAAT
Number of repetitions :
10
Begin Position :
148463
End Position :
149075
148463
AATTAATACAACTATTGTTAAAGTTAAAT
TTTTCTTTACACCTAAGTGGGTGTTTTGCATATA
148525
148526
TTTCAATACAACACTTGTTAAAGTTGAAT
AGAGCTTAAAGCTTCTGAAACGCTCTTATCTA
148586
148587
TTTCAATACAACACTTGTTAAAGTTAAAT
TGGAGTTAAGGCTAAATACATAAACCAGTATTTAGAA
148652
148653
TTTCAATACAACACTTGTTAAAGTTAAAT
TTCATCTTCTATTACTTCTAAATTAATATTGCAATAA
148718
148719
TTTCAATACAGCTATTGCTAAAGTTAAAT
ACAATATTAACGTACTTTTTGAAAGAAGTATCTAAG
148783
148784
TTTCAATACAACACTTGTTAAAGTTAAAT
ACTCTTCATAATAAACATCTTTTTTTATTTTATATA
148848
148849
TTTCAATACAACACTTGTTAAAGTTAAAT
TTTTTTTCATATGCTTTATATAAAAATTAGGAGTATA
148914
148915
TTTCAATACAACACTTGTTAAAGTTAAAT
CTATATATGAATAACAACTCTTCCCTTATACCTTTTA
148980
148981
TTTCAATACAACACTTGTTAAAGTTAAAT
TGAATTTAATAGTAGGAAATATAAGAGTTTTCCGACA
149046
149047
TTTCAATACAACACTTGTTAAAGTTAAAT
149075
Left flanking sequence : Till position 148463 (length
bp)
TATTATATAAAGAAATACTAAAATTATAATTTTTTATATTAGTAAATTGCTTTAAAAATAAAAAATAGCA
ATTACATAGATATATAATTGCTATTTTCAT
Right flanking sequence : From position 149075 (length
bp)
ACTTGAAAACAAGCCATTCTTAAAAAATAAAAAAACTCTAAAAGTAGAATGTGCCTATATTTATATTAAA
TTTTACCAGTCAATACAAAATTAATATTAT
Print the CRISPR sequence : From position
bp To position
bp