Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013670_3                                                                                                                 top


Strain : Xanthomonas oryzae pv. oryzae GCF_001746595 RefSeq :NZ_CP013670 (chromosome circular)
CRISPR id : NZ_CP013670_3
DR consensus (23 bp) : CGGCGGTCGTCACGGCGGTCGTCNumber of repetitions :4
Begin Position : 4091824 End Position : 4091996

4091824TTGCGGTCGTAACGACGGTCCTGGTAACGGGCGTCGCGATAACCATCACGGTAGCCG4091880
4091881TTGCTGTAGTAACGGCGGTCCTGACGCCACTCGCGGCGGTCGTCA4091925
4091926CGGCGGTCGTCACGGCGGTCGTCACGGCGGTCGTCACGGCGGTCGTCA4091973
4091974CGGCGGTCGTCACGGCGATCGTC4091996
Left flanking sequence : Till position 4091824 (length bp)
CACATAGACCGGCCCGTGATAACGCTGGCCACGGGCCCAATACGGACGCGGCGGCGGGCCGGGGCGGTAG
TACCCAGGGAGGTCATAGACATAGACCCGA
Right flanking sequence : From position 4091996 (length bp)
GCGCCAGTCACGGCGATGATCCGGGCCATAGCCGCGGTCATGGCCGCGGCGATCGTGGTCGCGATCCCAA
TCCCCGGCGAATGCAGCCGGTGCGAAGGCA
Print the CRISPR sequence : From position bp To position bp