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CRISPRs details
NZ_CP013678_1
Flanking alignement tool
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NZ_CP013678_1                                                                                                                 
top
Strain :
Xanthomonas oryzae pv. oryzae GCF_001746715
RefSeq :
NZ_CP013678 (chromosome circular)
CRISPR id :
NZ_CP013678_1
DR consensus (31 bp) :
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
Number of repetitions :
85
Begin Position :
859556
End Position :
865111
859556
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCTGCGACGGGGTTACCAGCTCCAGCCCGTCGCG
859620
859621
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTATCCCAGCAAAGACTTGCTCATACCCGTCGGGC
859687
859688
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCGGACAACATTGTGGGTCTTCCGGGATGCGGT
859752
859753
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGTCAATCTGCTCGCCGTTGAACACCGTCGCAAA
859818
859819
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGCGCGAGCGCTATAACAAGCGCTCGTTCTACGT
859885
859886
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTTCACGGGCCGTGGATACGTTACTACCCAT
859949
859950
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGGATCGAACCGGAGGAACGCGCCTTGAGGTCGG
860015
860016
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTCATCGCCGCTTGGCTCTTCGAGCTAGTCAGCTT
860081
860082
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGTCGTTTCGCCTGCGACTCGACGTGGGCCAC
860146
860147
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCAGCGTGCCCGCGCCGTTCCGCGTATAGAAC
860211
860212
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATGAGCATCCAGGTCGTCCCGCTCGCCCCGCGCCC
860277
860278
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACAGCGGCGCGCAAGTCACGAACGTCAGCATCCA
860343
860344
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGGGAGCGGTGTGTACTGCGCCGATACTCCGCGC
860408
860409
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GAGCGTTGCCGAGGACCAGGTGCACTAACCATTG
860473
860474
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTCCGATGGCTTTACCAACCACCCAACGGAGCCA
860538
860539
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGCCAGAATCCGCCGGTTCGTCCAGCCCTTGGC
860603
860604
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TACAGCCTTCTTCGAGCAGTAGTGCAATTGCGTCGCT
860671
860672
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAATAACACCGGTGGCGCGTACACCGTCACCGTCAA
860738
860739
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TAAATCGTCGGGGCCTAGATCGCCGTCGATTGCCG
860804
860805
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CATCACGCAGCACGGGCACGAGGCTTACAACGCGTT
860871
860872
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTAGCGTCTGACGGCACCGCCGATGTCCCCGTGCC
860937
860938
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GAGGCGCAACGTACGCACGCCGCCGCCGTCGGTGTG
861004
861005
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGTGCCTAGATTTAGGCACAATAGGCACCAAGGG
861069
861070
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGATAGACGGCCAGATGTATTTACTGCCCGCAAGGA
861136
861137
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGACCTCTGCTTAGGACTTGCCCAGTTGAAAGG
861201
861202
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTTTCCCACATCTCCATATCCGCCGTCTCCCAGAG
861267
861268
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGGACGGTCAGACGTGCATCCGGCGGGGTGAGG
861332
861333
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGGGATGTCATTGCTACTGTCACAGATGCTGACG
861398
861399
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGGTCTATACAGTAACTGCGGATCTGACAGCA
861462
861463
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCTGCAATTGATGCTGCCCCAGCCCCGTAGGCTCTG
861529
861530
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTCAGCGGCCACTTCGCCGCAGCCTGGTAGGCCAA
861595
861596
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTCCGAACCTCCGGATCGATTGGTCGGGCGGAATA
861661
861662
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCCAACTGCTTACGGTCTGCGGCGCGAACGCGGCG
861728
861729
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGCGGCGCGAAGTGGTCGGCGCAGTGGGACAC
861793
861794
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGACACGTTTCTTTTCCTTCCGGTATTTGTAGAT
861858
861859
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTCTAATAGCAGACGAGTTACCACCGTTTGCCA
861922
861923
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGCTGTGCCCAATCATTGATGGCGGCACGCCGAA
861988
861989
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGCTGCCAGGCTTGGATCAGCGGGCCTTGCACGAC
862055
862056
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCAGATGTACAGTGACACACTCTCAAAGAGGTCG
862121
862122
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGGCGGAGAGGGTGCCCCCATGTCTGAGCTTTACAA
862188
862189
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCTCTAAGTCCCTTGCTGAGAGGCTAGAGGCTGA
862253
862254
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTTCCGTAACGCCAACGAGGAGTTTAGTCATGCCC
862319
862320
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCCTTGCTGGTCTTATGCTCAACATCCCCCAG
862384
862385
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGGAGTTCGACGCGGCCGCCGACGCCGGGGCTG
862448
862449
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGTACTACAGAGCGCAACAGCCCGACCTGTAC
862512
862513
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTCCAGAGAGGTTGAGAACATTAACAAACAGAGGGA
862579
862580
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGGATCGCGCGATGAGGGCTTGTTCGTCCGCGTGAT
862646
862647
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGCAACCCTACGTCCCGTATGCCGGATCGTAGCG
862712
862713
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTCATCAAGTCGATTGCGAGCGAGTATTTCAC
862777
862778
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTTCCTTTTGGTTAGATAGAGTTAATTTTCAGTT
862843
862844
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGCTGTGCCCAATCATGCTCGGCGGGACGCCGAA
862909
862910
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTTCCCTTGACGGTGTGATGGCCGTCGGGGGTGGC
862975
862976
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGTGTGAGGTTTGCCGCTTGGTACCCGGCGAC
863040
863041
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGATCTGTAGAGGCTGGCCGAGCGCCATTGCTT
863106
863107
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCACACGTGCCCGGGCCTCCGCCTCATCTCGATT
863172
863173
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CATGCATACATACTGGCACAGGCAGGCACCAATG
863237
863238
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGACCATGACATACGAGTCGGCAGTGGCCGTGAGA
863303
863304
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCGGGGTAGGACCTCGTTCCAGAGGCGCGCATC
863369
863370
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCGAAAAACGCCCAGGGCTCGTGGTCGTGACCG
863434
863435
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCCGTCCGGGCGACGCACCTTGTTGGCCGTCAT
863499
863500
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGTCAAGATACTGGCATATGTGCCTAACTGTGTT
863565
863566
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGGCTAAGGGCGGACCTGTTACAGCATCACATTGACA
863633
863634
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGTCGCGGTCGGTGATACGCACGCGCCACAGGTA
863699
863700
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTTATGACGTTTAATGACTCCGTGTCCGTGAGCGA
863765
863766
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCCGGCCTGGTGGTCTTTGACATGCTGGACAACGT
863832
863833
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGTGCAGGAGTTCATTTACAAATACCGCAAGGA
863897
863898
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGACACAGCCCTCACCGTTGTAAGGACACTTG
863961
863962
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGGAAGCCACCCTGGCCAATGTCACCGACAGCCT
864027
864028
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTCACAATGCTGTGCCGTTTGGGCTTAAGACCAA
864093
864094
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTAAGACGGGTTGGGTACTGCTCAAGCATCTGATTG
864161
864162
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCTGCAAAGACCATGCGGTCAAGTCCTGCTGG
864226
864227
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTGCGTCTGATATCAGCCTTGGCAATTTGTTGGTC
864293
864294
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACCAATAAAATGACTGATATTACCGCTAAGCTG
864358
864359
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTGAGGGATCATCTGCGAGACCTCACTGGCAACC
864424
864425
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CATGCATACATACTGGCACAGGCAGGCACCCAT
864488
864489
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACTGTTGAGCAGGCAATATTGCTGACTGTGGGT
864553
864554
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGCTCGGGATTTGGTGACATGCTAGTTTTCAAC
864618
864619
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACATGCATACATACTGGCACAGGCAGGCACCCAT
864683
864684
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGCGCATGCTCTCCTGCAAGTGCTTGAGTCGCCAGT
864751
864752
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTTCAGCTGGTGTTCGAACTCTCGGGCAAGAGCTG
864817
864818
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTTGGCAAAGCTGTCATACTGGTCGTCTGTAAG
864881
864882
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGAGCTGTTTGCCACTGTTGGCAATCTGTCGGCG
864947
864948
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTCACACCATTTATAACGCCGGGGTTATTCTGATAT
865014
865015
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACATGCAGGGCGCGCGGTTGATGGGCTACGGCGA
865080
865081
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
865111
Left flanking sequence : Till position 859556 (length
bp)
GTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCACGCATCCAAGTGTCGCCTATATT
TCTGACTTATGAGTAATGCTGACGCGTCAT
Right flanking sequence : From position 865111 (length
bp)
GCCGCCAGCATAAGTGCTTGCGCGTCTTGAGGGAAAACCCGTCATTTCGCGAACAGGAACGCGAACAGGT
TCCATGCCTTGCAAATATGAGCACCCGCGA
Print the CRISPR sequence : From position
bp To position
bp