Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013741_4                                                                                                                 top


Strain : Mycobacterium bovis GCF_001483905 RefSeq :NZ_CP013741 (chromosome circular)
CRISPR id : NZ_CP013741_4
DR consensus (36 bp) : GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACNumber of repetitions :30
Begin Position : 3068384 End Position : 3070554

3068384CATGCCGGGGCGGTTCAGGGTTTTGGGTCTGACGACTCGCGGCGAGCACGTCTCACCCAGCAGGCGGTGAGGTTGG3068459
3068460GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGGACGAGCTGGACCGCATCAGCGATGCTGAGCTGAGG3068534
3068535GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGTCTCAATCGTGCCGTCTGCGGTGACACGCTCCAA3068607
3068608GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGACGATTGGGACATCGACATCGACGCGATCGTCGACGA3068683
3068684GTTTCCGTCCTCTCTCGGGGTTTTGGGTCTGACGACGTGATCTTCTCTCCTGGCGAGGTCAAGGAAATCGATGTGGA3068760
3068761GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCACCAGGATCAGCGCCAAGCCAGTTAGCGCAATCCA3068832
3068833GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTCCCGGACCATCTGCAGCTCGCCCGGGTCCATGCG3068904
3068905GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCGGAGTCATCCGCGCGGGCCGGCGCGATTGTTGCCGG3068977
3068978GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGATCCGCGAAATTCACTGCGCGTTATTCAAG3069038
3069039GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGAGCCGACCATCCGCATCACACCGAAAGGGTTGGCGCAA3069115
3069116GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGTGGGGAGAGGGAATGGCAATGATGGTCGACGAA3069187
3069188GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTCGGACAGCATCTCCCCGGGCGGGCAGCAGATATCCCAT3069263
3069264GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCGACCCGTGGCCGCCAGGTTGCCGCCGCCGTTGCTCACCTG3069340
3069341GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCGGAAGTCAACTAGAGCGGGTGTCGAACGCTGCCCG3069413
3069414GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTAGGCGGCCCCGGCGAGGCTGGGGGCGGTTTCACGC3069486
3069487GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGCGGAGCTGCGGCGCCGGATGATGGCGTTGCTCAAGAGCA3069562
3069563GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCAAAAACGGGGACGGCATGCTGCATGCCCTAACGTCGT3069637
3069638GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCAGCGCAGACGGCAGCCCCGAGTACTCGCTCTCCTCAG3069711
3069712GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACAGGCTGAAATTGAAGCCGGAAATGACGACGCATTGGT3069784
3069785GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTAAGCCCGCTAATCCCGCACAAGTGGTCAGAAAA3069855
3069856GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCTGATGATTGGTCGGCGTATGACGTGCTACTGAGGTGTT3069930
3069931GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACCCCTGAGCCACGGCATGTGCACGGCTCCGTGTTCAA3070004
3070005GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCGATGAATGATGCGCGCCAGCGGTAACGCGTGGGATGT3070079
3070080GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTCTGAAAATTCGTGGTCAACGAATTGTCGTCGAAAT3070151
3070152GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGGGCCGTGGGGCACTTACGGCGACGGCGCACAT3070222
3070223GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACCCCCTAGCCACGCCTGCCGTGCCATGCCGCGCCGCGA3070295
3070296GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACTTGGTCAAAAGCTGTCGCCCAAGCATGAGGCAAAAA3070367
3070368GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACACGACTAGGGGAGCGTGATCCAGAGCCGGCGACCCTCTATG3070444
3070445GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGACGTGCAAGAATTCCGGGTTGCAGTGCAACACGGTTTTAA3070518
3070519GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC3070554
Left flanking sequence : Till position 3068384 (length bp)
TGCGACCATCCGCACCGCCCGCTCACGCAGCTCCGGCGGGTACCTCCTCGATGAACCACCTGACATGACC
CCATCCTTTCCAAGAACTGGAGTCTCCGGA
Right flanking sequence : From position 3070554 (length bp)
TCTATGGACAATTCGTCCAGCGTGTGGTAACAATGCCTGCTGATGATGTCAAAAGAACACAAACTCCTCT
GCGCTGACAAGCCGTCCCCTTCCGTAGAAC
Print the CRISPR sequence : From position bp To position bp