Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013992_3                                                                                                                 top


Strain : Flavobacterium columnare GCF_001534645 RefSeq :NZ_CP013992 (chromosome circular)
CRISPR id : NZ_CP013992_3
DR consensus (36 bp) : GTTGTAGATACCCTTCAAAATAAGGGCTTTCCCAACNumber of repetitions :3
Begin Position : 758039 End Position : 758235

758039CGCTTGTCCCTCCTTCAAAATAAGGGCTTTCCCAACCGTCAGTCGTTCGTTAATGGGATGATGGT758103
758104GTTGTAGATACCCTTCAAAAAAAATGAATTCGGTTTCAAATGCCCACGCGCCTCCTGGCTACATCGCTAAAATAGTCCACTGGACTATTTCTTAA758198
758199CGCTCGTCCCTCCTTCAAAATAAGGGCTTTCCCAAC758234
Left flanking sequence : Till position 758039 (length bp)
AAGTAGTTGTAGATACCCTTCAAAAAAAATGAATTCGGTTTCAAATGCCCACGCGCCTCCTGGCTACATC
GCTAAAATAGTCCACTGGACTATTTCTTAA
Right flanking sequence : From position 758235 (length bp)
ATAGATTCACGGATTATTTGGCTGATTTAGTTGTAGATACCCTTCAAATAATCATTCACGAACTCCTATA
AAAAAACAATAGAAACAGCGTGAGTAAAAT
Print the CRISPR sequence : From position bp To position bp