CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP014003_1
Flanking alignement tool
Page manual
  
Home Page
NZ_CP014003_1                                                                                                                 
top
Strain :
Synechococcus sp. PCC 73109 GCF_001521855
RefSeq :
NZ_CP014003 (plasmid unnamed5 lin)
CRISPR id :
NZ_CP014003_1
DR consensus (37 bp) :
CTTTCCAACCACTAAATCCCGACCACGGGACTGAAAC
Number of repetitions :
11
Begin Position :
38
End Position :
798
38
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
CCAAGCTTTCTATCAGGCTTCTGATTGACCCAACG
109
110
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
TTATGGCGAGTCATCCGGGGACAAGAGTGCGGTTT
181
182
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
ACGGCGGGGGGGGCGCGAGCACAGAAGTTATTGCTGTGG
257
258
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
CACAATGCGATGCGATTGAGTTTTGACGCGGGGCAATT
332
333
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
TTACGAAAAGTGCCACCCGGCCAAAGAGAAAAA
402
403
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
AAGCAAGTGGTGAAGCAGAAACCCGCTCTGTGACT
474
475
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
ATCGGCCAATTACCAGGGGGAAACTATCTGTCTT
545
546
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
TAACTCCATATTCCCTGGTTTTGTGTGTTGACTTGG
618
619
CTTTCTAACCACTAAATCCCGATCACGGGACTGAAAC
TCATTTGCGCCATTGTTTTTCCTCAATTAGAAAG
689
690
CTTTCCAACCACTAAATCCCGACCACGGGACTGAAAC
CAGTACGAGGCAGTGGGGGGAACCAGTGATTTAGA
761
762
CTTTCCAACCACTAAATCCCGACCACGGGACTGAAAC
798
Left flanking sequence : Till position 38 (length
bp)
AAGCGCGAAAACAGATTGCCTGGGAGAAAAACTAGAA
Right flanking sequence : From position 798 (length
bp)
ATATTTCTTAAAACTTGTTTCGTTTCTTTACCTTATTCTTCCTGGCCTCTACTATCTTTTGGAGTTACTG
GGTTTACCGTGACTACATGGAACTCATTAA
Print the CRISPR sequence : From position
bp To position
bp