Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014230_4                                                                                                                 top


Strain : Desulfomicrobium orale DSM 12838 GCF_001553625 RefSeq :NZ_CP014230 (chromosome circular)
CRISPR id : NZ_CP014230_4
DR consensus (32 bp) : GTTTCAACACACAGCCGCCCGAAGGCGGCCGGNumber of repetitions :28
Begin Position : 2227050 End Position : 2228900

2227050GTTTCAACACACAGCCGCCCGAAGGCGGCCGGTTATCCGTGACGGTGGTGCCGATGTATGCCGGAGAG2227117
2227118GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGGTGCGTCACCACCTCTGCCTGCTCTCTTATCAGT2227184
2227185GTTTCAACACACAGCCGCCCGAAGGCGGCCGGTTATCCGTGACGGTGGTGCCGATGTATGCCGGAGAG2227252
2227253GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCTTGTCAGCCGTGGAAACCCTTTCAAGGCTTTCAAGGG2227322
2227323GTTTCAACACACAGCCGCCCGAAGGCGGCCGGTTATCCGTGACGGTGGTGCCGATGTATGCCGGAGAG2227390
2227391GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCTTGTCAGCCGTGGAAACCCTTTCAAGGCTTTCAAGGG2227460
2227461GTTTCAACACACAGCCGCCCGAAGGCGGCCGGTTATCCGTGACGGTGGTGCCGATGTATGCCGGAGAG2227528
2227529GTTTCAACACACAGCCGCCCGAAGGCGGCCGGTTATCCGTGACGGTGGTGCCGATGTATGCCGGAGAG2227596
2227597GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGGCCCAGCAGGATGCCGGGCACAACAACAAAAC2227661
2227662GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCATCATCAGCAATAAGCGTCATACGCTTATCACC2227727
2227728GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCTGTTCGATCTCCCTGGCTCGTTCCAGACACTTGG2227794
2227795GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGAAGCGGGACTCGTGGACCGTATCGGCAATTTTG2227860
2227861GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGAGAACAACGTCGCCGGGGCCATTTCGCCGGACGT2227927
2227928GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGGTGCGTCACCACCTCTGCCTGCTCTCTTATCAGT2227994
2227995GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGCCAGCGCACGCAAATCTTGTTGCGGCAGTTTTTCGT2228063
2228064GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCGAGGAGTACAGGGATGCCTGTACTCCAGAAAAAAG2228131
2228132GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGTCGAGTCCGCCGCGAGCGCGAAGAACGCATGATC2228198
2228199GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCCGAATCCATGACTCCGCCCTTCCGCCCTGTCAGG2228265
2228266GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGGAACATGTGGGTGCATGCGCCGCTTACGGCGCA2228331
2228332GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCCGGTCGGAAAGGGAAAGCCGCTCATCGAGCCGAA2228398
2228399GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGCTTTTTGAAGAGTCATTGCGCCGTCTGATGCCCCT2228466
2228467GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCTCCCTCTGCCTGGTTTTATATCTCTGGATTTTCAA2228534
2228535GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGTGGTGGATTTTGACAGCCATCCAAAAACCTCAAA2228601
2228602GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGGTGGATTTTGACAGCCATCCAAAAACCTCAAA2228666
2228667GTTTCAACACACAGCCGCCCGAAGGCGGCCGGATCCTCTTTTCCCATTGTCTGCGCCTTGTAGCATT2228733
2228734GTTTCAACACACAGCCGCCCGAAGGCGGCCGGGGACAGTGTTCCGGCTGGATCGCCGTTTCAACCGGCG2228802
2228803GTTTCAACACACAGCCGCCCGAAGGCGGCCGGCAAAATCAAAACTACAGTGAATAGAATAACCGCT2228868
2228869GTTTCAACACACAGCCGCCCGAAGGCGGCCGG2228900
Left flanking sequence : Till position 2227050 (length bp)
TTTATAGCATTGGGGCGGTTCCTGATAATATCTGACGTCGCTTCATAGCCACCCGAAGGCGGCTGCACGG
ATCAGGATGCCGTGGCCTGCTCCCTGGCGG
Right flanking sequence : From position 2228900 (length bp)
AGCCTCTGCTGAAACTCTGGCTACAAAATGCTTCTCAGCCCTATTTCGCCAAAGCCTCCAACAAAAGCAC
ATATGATAGAATATTATACCTTATTAATCT
Print the CRISPR sequence : From position bp To position bp