Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014284_1                                                                                                                 top


Strain : Bacillus thuringiensis GCF_001595725 RefSeq :NZ_CP014284 (plasmid pBT1850294 c)
CRISPR id : NZ_CP014284_1
DR consensus (23 bp) : CACACACCTATATAAGGTGCGACNumber of repetitions :4
Begin Position : 142740 End Position : 142961

142740TAGGCACCTATATAAAGTGCGACGTAATTCTTCTTCTGTGGATATATCTCGTCTAATATTTCAATT142805
142806CACACACCTATATAAGGTGCGACTTGTTTACTTCTATTTTTGCATTGAAATAATCTAAATTTCAATC142872
142873CACGCACCTATATAAGGTGCGACATATCATCGAGGGGATGTTTGGAATCTCCCTTATATTTCAATC142938
142939CACGCACCTATATAAGGTGCGAC142961
Left flanking sequence : Till position 142740 (length bp)
GGCACTAAATTACTATCAATTATTTTATCAGTCTTACTCCACACACCTGAGATGCGAAGAAAGTAATCTA
GATAAGGCAGCAAGTAATTTCATTTCAATT
Right flanking sequence : From position 142961 (length bp)
AGCGATTTTTGTTTAAAACCATACAAAAATACACTAATTCTGTTCAAAAATATACATATTTCTTTATTTA
ATAAGAGAATTTGTATAAAAAATATTAAAC
Print the CRISPR sequence : From position bp To position bp