Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014912_6                                                                                                                 top


Strain : Lactobacillus paracollinoides GCF_001702155 RefSeq :NZ_CP014912 (chromosome circular)
CRISPR id : NZ_CP014912_6
DR consensus (36 bp) : GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCNumber of repetitions :15
Begin Position : 1499870 End Position : 1500829

1499870GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCAAGTCGGCGAGTTGTTGATCCACTTAGCTG1499935
1499936GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCACTAAAATGCGGCACAAAATGCCCCACAAC1500001
1500002GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCTTCTGCTTCCCCATTCCTTTCAACGAATCA1500067
1500068GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCCAGTTGCTGATGATTCAGCAGCCGAATTAA1500133
1500134GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCAATTTTACAATCGCATGCAGGAACTTGGCT1500199
1500200GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCCACATCATTATTAAATTTATCGCCGTTAAT1500265
1500266GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCATCTCGGGGTACAGTTGGATTATCTCGACC1500331
1500332GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCACAGTGGTGCGGTTATCGGCAAGCATAACG1500397
1500398GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCCGTCCACATTGACATAAGCTGCGGTGTCCT1500463
1500464GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCCGCTTGATACCCTGCTCCGTCTCCTGCTCG1500529
1500530GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCGGTGCCCGCCGGCTCTTCTTGCAAGTGCTA1500595
1500596GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCCAGCGCCAGTTGAACCTTGTGGTTGAGTTT1500661
1500662GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCACAAACACCGTGAAGTGAGTACCGTTCTTT1500727
1500728GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGCATTATTTTATTCACAAGGTCAAACACGAAC1500793
1500794GTTTTAGATGAATATCAAATCAATGAGGTTCAAAGT1500829
Left flanking sequence : Till position 1499870 (length bp)
CCAACGAAAGAGTTTGTTTGAGAATGCTGACTATTACTATATAGACCCGGATTTTATGCTATGGCATAAA
TAAAAGATTAATAATTTATGTGTAAATAAT
Right flanking sequence : From position 1500829 (length bp)
GAGCTAGATTTGAGATATAGCCGGAGCTGGGTTTTAGAAGGGTTTAACCAAACTATTCACTTTGGTACTA
GAGTTATTGGTCCAATTTCAATACCTATTA
Print the CRISPR sequence : From position bp To position bp