Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP015243_3                                                                                                                 top


Strain : Halotalea alkalilenta GCF_001648175 RefSeq :NZ_CP015243 (chromosome circular)
CRISPR id : NZ_CP015243_3
DR consensus (32 bp) : GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACNumber of repetitions :17
Begin Position : 299777 End Position : 300880

299777GTTTCTATCCGCGCGGCCGTGCGAGGCCGCGACACCCAAGCGACATACCCGCAGGCAACCACCACAT299843
299844GTTTCTATCCGCGCGGCCGTGCGAGGCCGCGACTACCCGTAGCCCTTCGACCCGGGCCGGGGAGGTAC299911
299912GTTTCTATCCGCGCGGCCGTGCGAGGCCGCGACAGCGATAGCCTCTCCCTACACCACGCTCGCCGAGGT299980
299981GTTTCTATCCGCGCGGCCGTGCGAGGCCGCGACATGCCATGGCGTCGTTGGATGCCGCATAGGAGAA300047
300048GTTTCTATCCGCGCGGCCGTGCGAGGCCGCGACGCGACCTCTACGTCTTCCTGTCTCAGTACATGCA300114
300115GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACCCCCACGGCATTTGTCCGCTGCTGGATTCACGA300179
300180GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACGGCAAAGTCACGCCGAGATCGTGGCAATACTGG300244
300245GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACCCCTCCTAGGCCAGCAGATCAGTCAGCGCTCGAGC300311
300312GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACCCCTTCACCGACCGCCCGAGGCGATCGGCTATCTGT300379
300380GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACATCGAGGACAAGTCTAGCGGCACCGGGCTGATTCA300446
300447GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACGGCGACTTCGTCGTCGTCGACATGCTCATCAAAGC300513
300514GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACCTCGCGGCTCTCGATGTCCTGGCGGCGTTCAGCCTT300581
300582GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACCAGCACAAGGACTGGTACATGCGTCGCGCTCAG300646
300647GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACTCGATGACCGAGGCGCAGTCCGAACCGGTGATCGT300713
300714GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACATTCATCGACGGGCTCAACCCTGCCGCGATCATCTC300781
300782GTTTCTATCCGCGCGGCCGTGCGGGCCGCGACTCCAGCCCTGCGAGCCTGATCACAGGGATCGACAC300848
300849GTTTCTATCCGCGCGGCCGTGCGGGCCGCGAC300880
Left flanking sequence : Till position 299777 (length bp)
GACAACGCTGGAGCAGGCGAAGTGGGCCTGTTCTTTTCTACCCATACGGTGGTGCGAGGCCGCGACGGTC
AATGCGCCATTCGAACCATTGCACTCCCAA
Right flanking sequence : From position 300880 (length bp)
CCCCACTCTCATAACATATTGATAATGAAAGTGAAATACTTTTGGGACAGCGAAACTCTCCAAGGATGAG
AGTTAATTTTTTAATTCCCCCCGTATATGA
Print the CRISPR sequence : From position bp To position bp